Chlorobium limicola: Clim_0386
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Entry
Clim_0386 CDS
T00766
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
cli
Chlorobium limicola
Pathway
cli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clim_0386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_0386
Enzymes [BR:
cli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clim_0386
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Clim_0386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_wedge
tRNA_anti-codon
RecG_dom3_C
ResIII
HHH_5
AAA_30
AAA_16
SecA_DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ACD89479
UniProt:
B3EFU6
LinkDB
All DBs
Position
423547..425667
Genome browser
AA seq
706 aa
AA seq
DB search
MAVLSSLTTLKGVGPKRATILEQAGIATPENLFDYFPRRYLDRRTIRRIGELRAGEAVTV
VGTVLQARLEGTQPGRMRFKVVLADGTGSIELTWFKGVRYFASSVAPGDALAVNGKVGVF
GRQMQMQHPDFEHLSRTSVHENQEGGSDYELFHTGRIIPLYPVSAAMKQGGLHSRQLRTI
IAGAFERFPPGRDENLTPGIIREYGLLPLAEAYREMHFPSSPEKLEEARTRMKWTELFYT
QLLFALKHAHLERNHSAPCFTHSGEVTRRFYAGLPFALTDAQKQVIREIYRDLKRARPMN
RLLQGDVGSGKTMVAMFSMALAADNGLQSAFMAPTEILAVQHFLSLKRSLHPLGIDVALL
AGRQRKKEREAALSGLADGSLTVAVGTHAMIEKGVSFSRLGLVIIDEQHRFGVLQRKALQ
DKAASPHVLLMTATPIPRTLTMAGFGDLDVSVIDAMPAGRVPIRTQLVSEHSKNRVYELL
RREVASGRQAYIVYPLVEESEKIDLRAAVESYGELAATTLGDLRLGLIHGQMTPEEKESA
MDRFRAGEIDVLVGTTVIEVGVDVPNATVMVIEHAERFGLAQLHQLRGRVGRGRHASSCF
LIHAPFSGDAGERLRAMESTPDGFKISEIDAAIRGAGNVLGKEQAGMVSGLKLADPLLDA
SLMQTARKAAFALAAEDGELRAREHAMIRSCYLRYYHDRSILADIG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgtattatcgtcattgaccacgctgaaaggggtcgggccgaaacgggcgaccatt
ctcgaacaggcaggcattgcaactcctgagaatctgttcgattattttccccgccgctat
ctcgatcgccggacgatcaggcgtatcggggaactccgtgccggtgaagcggtgacggtg
gtgggaacggttctgcaggcccgtcttgaaggaacccagccgggccggatgcgcttcaag
gtcgttcttgccgacggtaccggatcgatcgaactgacctggttcaagggagtccggtat
ttcgcttcgagcgttgcgccgggtgatgcgcttgcggtgaacggaaaggttggagttttc
ggacgtcagatgcagatgcagcacccggatttcgagcatctcagcagaacctcggtgcat
gaaaaccaggaggggggttctgattacgaactgtttcataccggcaggatcataccgctt
tatcctgtcagtgcggccatgaaacagggtggtttgcattctcgccagctgcgcaccatc
attgccggagctttcgagcggtttcctccgggacgggatgagaatctcactccaggaatc
atcagggagtacgggctgcttccgcttgccgaggcctatcgcgaaatgcattttccttcg
tcgcctgaaaagctcgaggaggcgagaacccgtatgaaatggacggagctgttttacacg
cagctgctttttgcgctgaagcacgcacatcttgaaaggaatcattccgcgccctgtttt
acccattcaggtgaggttacccggcggttttatgccggattgccgtttgcattgacggat
gctcaaaaacaggtgatcagggagatctatcgcgatctcaaacgtgcccggcccatgaac
cgcttgctgcagggggatgtgggatcgggcaaaacgatggtggcgatgttttccatggct
cttgccgccgataacggactgcagtcggcgttcatggcgccgacggaaattcttgcggta
cagcactttctttcgctgaaacgctctctgcatccgctcggcatcgatgtggcgctgctt
gcgggacgtcagagaaaaaaagagcgggaagccgctctctcgggtcttgcagacggttcg
ctcacggtagcagtgggtacgcatgccatgatcgaaaagggggtttctttttccaggctt
ggtctggtaattatcgatgaacagcaccgcttcggcgttctgcagcgtaaagccctgcag
gataaggctgcaagtccgcatgtgctgctcatgacggccacgccgattccgagaaccctc
accatggccggattcggagatctcgatgtctccgttatcgatgcgatgcctgcggggaga
gtgccgataagaacgcagcttgtttcggaacattcgaaaaaccgggtttatgagctgctt
cgtcgtgaggttgcatcgggaaggcaggcttatattgtttatccgcttgtggaggagtca
gaaaagatcgatcttcgggcagcggtcgagagctatggggagcttgccgctacgacgctt
ggtgatctgcgacttggcctcattcacggtcagatgactccggaggagaaagagtcggcc
atggatcggttcagagccggggaaattgacgtgcttgtcggcacaacggtcatcgaggtc
ggagtcgatgtgcccaatgccacggtaatggtgatcgagcatgccgaacggttcgggctt
gcgcagcttcatcagttgaggggtcgggtcgggcgtggccggcacgcttcgagctgtttt
ctgattcatgcccccttttccggcgatgcgggagagcgccttcgggctatggagtcgact
cccgacgggttcaagatttcggaaatcgatgcggctattagaggggccggcaacgtgctc
ggcaaagagcaggccggtatggtgagcggtttgaagcttgccgatccgcttcttgacgct
tcgctcatgcagacggcccgcaaggcagcgtttgcgcttgccgcagaggatggcgaactg
agagcgcgggaacatgctatgatcagaagctgttatttgcgctattatcatgaccgttcg
atacttgccgatatcgggtga
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