Chlorobium limicola: Clim_0476
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Entry
Clim_0476 CDS
T00766
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
cli
Chlorobium limicola
Pathway
cli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clim_0476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_0476
Enzymes [BR:
cli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Clim_0476
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clim_0476
RecFOR pathway proteins
Clim_0476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ACD89569
UniProt:
B3EG36
LinkDB
All DBs
Position
539937..540509
Genome browser
AA seq
190 aa
AA seq
DB search
MVVLGVDPGSLHTGYGVIRYDNAGFHLLGCGVIRLHRRKSYFERIGEIYRELDSVIGGYA
PVRLALETVFLNKNVQSALKLGQVRGAVIALAMNHRLELSEYAPREVKAAVTGRGAASKE
QVAFMVTRMLKITGNPATHDVTDALAIALCDLLKTGMGSAAVPQSVVSSGSAGKKNWAQF
VQSNPGMVVR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgcttggcgttgatcccggtagcctgcataccggatatggggttatcaggtat
gacaacgccgggtttcatctccttggttgcggagtaattcgtcttcatcgccgaaagagc
tatttcgaacgtataggggagatttatcgggagctcgattcggtgatcgggggttatgct
cctgtccgtctggcgcttgaaaccgtgtttttaaacaagaatgttcagtcggccctcaag
cttggtcaggtacggggtgccgttatcgcactggcgatgaatcaccggcttgaactgagc
gagtatgctccccgcgaggtcaaggccgccgttacgggaagaggtgcggcaagtaaagag
caggttgcttttatggtaacgcgtatgttgaagattaccggaaatccggctacacacgat
gttaccgatgctcttgctattgcgctctgtgatcttctgaaaacgggcatggggagtgct
gctgttccgcagtccgttgtttcttcaggttcagccgggaaaaaaaactgggcgcagttt
gttcagtccaatcccggtatggtggtgcgctga
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