Chlorobium limicola: Clim_0485
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Entry
Clim_0485 CDS
T00766
Name
(GenBank) aminotransferase class I and II
KO
K10915
CAI-1 autoinducer synthase [EC:2.3.-.-]
Organism
cli
Chlorobium limicola
Pathway
cli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clim_0485
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GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACD89578
UniProt:
B3EGE1
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Position
550833..552077
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AA seq
414 aa
AA seq
DB search
MFTDDSAFEQPGYGREFSVSVFPDFLEKRLQACHEELFAPRKNKKPLVLGNRMPDAAAIM
LQSNDYLNVSNHPVIRRAQLDTLNEISQEPVMSAVFLHENSGKHDFEKRMAAYTGFESAI
LCQSGWAANAGLMQVIADSTTPVYIDFFTHMSLWEGVKIAGAVPYAFRHNDPSHLERLIR
EHGQGVVLVDSLYSTTGDISPLTEIVGIANRYGCISVVDESHSLGTHGEHGAGLVNECGL
AGQVHFITASLAKAFAGRAGIICCSAKFAKYYPYMAFPAIFSSTLLPFEIAGLSATLEVI
EAGDDRRRALYEKSRYFRDRLRELGYNIASQSQIVAIEGGLESNTELLRDALEDRNVFGS
VFLAPATPKTRSLMRFSVHSGLAMEDLDYVLQVCEDIRDEIDMWNWKSTKRQKT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgatgactcagcttttgaacaacccggttatgggagggagttctccgtatcg
gtctttccggattttcttgaaaaacgccttcaggcttgtcatgaagagctgttcgcacca
agaaaaaacaaaaaaccccttgttctcggaaatcgtatgcctgatgccgctgctatcatg
ctgcagagcaacgactatctgaacgtttcaaaccatccggttattcggcgggcacaactg
gataccttgaacgagatatctcaggaaccggtcatgtcggcagtttttcttcatgaaaat
agcggaaaacacgattttgaaaagcgaatggccgcatataccggttttgaaagcgctatt
ctctgtcagtccgggtgggcagccaatgcaggattgatgcaggtcatcgcagacagtaca
actccggtttatatcgattttttcacacatatgtcactctgggagggtgtcaagattgcc
ggagcggttccgtatgcctttcgtcataacgatccttcccatcttgaacgtctgatcaga
gaacatgggcagggagttgttctggtcgattctctctacagtactaccggagatatttcg
cctctcaccgagattgtcgggattgccaatcgatatgggtgtatttccgttgtcgatgaa
tcgcattctctcggaacgcatggagagcatggggccggattggtcaatgagtgcggattg
gcgggtcaggtgcatttcattaccgcaagtcttgcaaaggcatttgccggacgtgccggc
attatctgttgctccgcaaaattcgctaaatattatccttatatggcctttcccgcgatt
ttcagttcaacgcttcttcccttcgaaattgcaggactgagcgcaacacttgaagtcata
gaggccggagatgatcgcagacgggctctttatgaaaaatcacgctatttccgggacagg
ctcagggagcttggatacaacattgcaagtcagtcgcagattgtcgcgatcgaaggcggt
cttgaatccaatacggagcttttacgtgatgcccttgaagatcgaaatgtattcggatcg
gtttttcttgcgccggctacaccaaaaacccgttccctgatgcgcttttcagtgcatagc
gggcttgctatggaagatctcgactatgtcctccaggtttgtgaagatatcagggacgag
atagacatgtggaactggaaatcaacaaaacgacagaaaacatga
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