Chlorobium limicola: Clim_0602
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Entry
Clim_0602 CDS
T00766
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
cli
Chlorobium limicola
Pathway
cli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clim_0602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cli02000
]
Clim_0602
Transporters [BR:
cli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Clim_0602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
AAA_18
AAA
CoaE
nSTAND3
AAA_29
TsaE
ATP-synt_ab
IstB_IS21
NACHT
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ACD89689
UniProt:
B3EH09
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Position
674253..675236
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AA seq
327 aa
AA seq
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MNPQHQLLSAKDIFVHFPLKSGGVSGKARRVSAVNGVSFEVNKGETLGLVGESGCGKTTL
GRALMRIGHGIVDGTVVFDGREISSLSNRAFGPLRKEMQMIFQDPYGSLNPRLTIGQTIA
EVLAVHRLAKGEAARKKTLELLDIVGLNSEYADRYPHEFSGGQRQRVGIARALAVNPSFI
ICDEPVSALDVSIQSQIINLLKDLQRDFGLTYLFIAHDLSVVEYISDRVAVMYLGKIVEI
TSSQELYTNPKHPYTRALLSSIPVPEPDGKKERILLKGDLPGPMHIPSGCSFHPRCPVAK
PECSKREPRLLPLDGNDAHRVSCLLYE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacagcatcagctcctctcggcaaaggatattttcgttcattttccgcttaaa
tcagggggtgtgtcgggtaaggcgcggcgggtgagtgccgttaacggggtttcgttcgag
gtgaacaaaggcgaaaccctcggtcttgtcggcgagtcggggtgcgggaaaaccactctc
ggcagggcgcttatgcgtatcgggcacgggattgtcgacggaacggtcgtgtttgacggc
agggagatatcctcgttgagcaaccgcgccttcggccctttgcgcaaagagatgcagatg
atttttcaggacccctacgggtcgctcaatcccaggctgaccatcggccagacgattgcc
gaggtgcttgccgttcaccggctggcaaaaggtgaggctgcccgcaaaaaaacccttgaa
ctgcttgacattgttggattgaacagcgagtatgccgaccggtatccgcatgagttttca
ggagggcagcggcagcgggtgggcattgcaagagcacttgcggtaaatccgtcctttatc
atctgcgatgaaccggtatccgctctcgatgtttcgattcagtcgcagatcatcaacctc
ctgaaagatctccagcgggatttcggacttacctatctgtttatcgctcacgatctttcg
gttgtcgaatacatttcggaccgcgtcgcggtgatgtatctgggtaaaatcgtcgagatc
acctcatcgcaggaactctataccaatcccaaacacccctatacgcgcgcgctgctctcg
tccatacctgttccggagcctgacggaaaaaaagaacggattcttctcaaaggggatctt
ccgggcccgatgcatatcccttccggctgcagctttcatccgcgttgtccggttgcgaag
ccggagtgcagcaagagggagccccggctgctgccgctcgacgggaacgatgcccatcgg
gtgagttgtctgctctatgagtga
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