Chlorobium limicola: Clim_0808
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Entry
Clim_0808 CDS
T00766
Name
(GenBank) biotin/lipoyl attachment domain-containing protein
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
cli
Chlorobium limicola
Pathway
cli00020
Citrate cycle (TCA cycle)
cli00620
Pyruvate metabolism
cli00720
Other carbon fixation pathways
cli01100
Metabolic pathways
cli01120
Microbial metabolism in diverse environments
cli01200
Carbon metabolism
cli01230
Biosynthesis of amino acids
Module
cli_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
cli_M00614
Anoxygenic photosynthesis in green sulfur bacteria
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Clim_0808
00620 Pyruvate metabolism
Clim_0808
09102 Energy metabolism
00720 Other carbon fixation pathways
Clim_0808
Enzymes [BR:
cli01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Clim_0808
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
GCV_H
HlyD_D23
HlyD_3
RnfC_N
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ACD89888
UniProt:
B3EI58
LinkDB
All DBs
Position
883783..885618
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AA seq
611 aa
AA seq
DB search
MKKIRFMDVSFRDGFQSCYGARVKTADFIPALEAAVQAGTDNFEIGGGARFQSLYFYCQE
DAFDMMDAARRIVGPDINLQTLSRGANVVGLVSQSRDIIDLHARMFKKHGITTIRNFDAL
MDVRNIAYSGQCIHNAGLKHQVVIALMGLPPGLKETYCHTPQFYLDKLREILDAGIPFDS
VAFKDASGATTPVVVYESIKGARKMLPEGTVIEFHTHDTAGMGVACNYAAIEGGADIIDL
AMAPVSGGTAEVDILTMWHRLRGTDYTLDIDHEKYIEVEGLFMNQMEKYYMPPEAKEVNP
LIPFSPMPGGALTANTQMMRDTNTLHLFPEVIRNMREVVAKGGFGSSVTPVSQFYFQQAF
ANTVQGPWKKITESYGKMVLGYFGRTPAEPDPEVVRLASEQLGLQPTTEDVHDINDRNPE
LGIAFNRGLLEKAGLPTTEENIFISATCGAKGISFLKGDKPLGIRFKADVEAEAAAKAAP
KNVSSPTVSTAKPAKSGMSNYIITVDGKSYNVSVAEGTGAVKSAAPTVPAAATSQAQAAG
EGTPVETSLPGTVMAIEVEVGDMVREGDDVVIIEAMKMESPVKAPKSGKVVSIDVAVGDT
VATGDALLYIA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattcggtttatggatgtttccttccgtgacggtttccagtcctgttacgga
gcgagggtgaaaactgcggatttcattcccgcgctcgaagctgcagtgcaggcgggtacc
gataattttgaaatcggcggcggtgcgcgttttcagagtctgtacttctactgccaggag
gatgcattcgacatgatggatgccgccagacggatcgtagggccggatatcaatctgcag
accctgtcgaggggcgccaacgtggtcggcctggtatcacagtcgcgcgacatcatcgac
ctgcatgcccgaatgttcaagaagcatggtataaccaccatccgcaatttcgatgcgctc
atggatgtgcgcaacatcgcctactccggccagtgcatccacaacgccggtctgaagcat
caggtggtgatcgccctgatgggacttcctccggggctgaaggagacctactgccacacc
ccgcagttctatctcgacaagctccgcgagattctcgatgccggcattcctttcgacagc
gtggccttcaaggacgcatcgggagccacaacgcccgttgtcgtttacgagtcgatcaag
ggcgcacgtaaaatgctgcccgaaggcaccgttatcgagttccacacgcacgatactgcc
ggtatgggcgtcgcctgcaactacgcggccatcgagggcggagcggacatcatcgatctt
gccatggctccggtcagcggtggtacggccgaggtcgatatcctcaccatgtggcacagg
cttcgaggcaccgattatacgctcgacatcgatcatgagaagtatatagaggttgagggt
cttttcatgaaccagatggagaagtactacatgcctcccgaagccaaggaggtgaacccg
ctcataccgttctctccgatgccgggtggagccctgaccgccaatacccagatgatgcgc
gacaccaatacgctccatctctttcccgaagtgatccgcaatatgcgcgaagtggtcgcc
aaaggcggtttcggttcatcagtgactccggtttcgcagttctacttccagcaggctttc
gccaacacggttcaggggccctggaaaaagatcaccgaaagctacggcaaaatggtgctt
ggctatttcggacgcactccggctgagcctgatccggaagtggtgcgcctcgcctccgag
cagctcggcctgcagcccaccaccgaggacgtgcacgacatcaacgaccgcaatcccgaa
ctcggtattgctttcaatcgtgggcttcttgaaaaagcgggcctgccgacaaccgaggag
aacatctttatttcagctacctgcggcgccaaaggcatctctttcctcaagggcgacaag
ccgctcggcatccgcttcaaggccgacgtcgaggctgaagccgccgccaaggccgctccc
aaaaacgtttcttcaccaaccgtatcaacagctaaaccagcaaaatcaggcatgtcaaac
tatatcattaccgtggacggcaagtcctacaatgtttcggtagcagaaggcaccggcgca
gtaaaatccgccgctccgacagttcctgccgcagcgacgtcccaggctcaggccgcaggc
gagggtactccggtcgaaacctctttgccgggcaccgtgatggccatcgaagtggaagtt
ggagacatggtcagggagggcgatgatgtggtgatcatcgaggctatgaagatggagtcg
ccggtcaaggcgcccaaaagcggcaaggtggtttcgatcgatgtcgccgtcggtgatacc
gtagccaccggtgatgcattgctttatatcgcatga
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