Chlorobium limicola: Clim_0812
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Entry
Clim_0812 CDS
T00766
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cli
Chlorobium limicola
Pathway
cli03030
DNA replication
cli03430
Mismatch repair
cli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clim_0812
03430 Mismatch repair
Clim_0812
03440 Homologous recombination
Clim_0812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cli03032
]
Clim_0812
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_0812
Enzymes [BR:
cli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clim_0812
DNA replication proteins [BR:
cli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Clim_0812
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Clim_0812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
ACD89892
LinkDB
All DBs
Position
891317..894886
Genome browser
AA seq
1189 aa
AA seq
DB search
MEFVHLHVHTHYSMQSSPVFPGELFSACRQLGMKSVAVTDYCSIFNMPELFSDAKKADVK
LIIGTELFLLESATHSQAKNTFSPSIILLVQSEAGYRNLCVLLSRASREGFINGTPHLES
RLLEDHHDGLICLSAYSSGRIGRALLAGSLHEAETVTGYYKDIFGDNFYLELQRHATSFD
DKLNAATIALAEKFSVELVATNNVHYLDRKDSGCYRAMIANRTKEKLSSQNLQALPGSEH
YLKTAEEMARIFPDNGSALANSARIAEKCTYVFKKKEPILPHYRLPDGFDDEAKYLRHLT
WEGAAEKYAGSEADGITEEDVRARIELELGVIEKMGFSSYFLIVSDLISASRRMGYSVGP
GRGSAAGSIVAYLTGITRIDPLKYKLLFERFLNPERLSMPDIDIDFTPVGKQKVLEYTVE
KYGDQSVAKVVAIGTLGAKAAIRDAGRVLEVPLPIVDRLAKLVPTKPGITLEKAISEVRD
LKQFVESSPENLKLLEYARALEGRARNVSMHAGAVVITDGPLEEQVPLYVSNKIETEVRK
YADEIDLDETVQIGVKGADGVDEKQIVTQFDKNWIETAGLLKIDYLGLETLAVIDETLHL
IRRRHNIDIDLEKVPMNDRKTFRIFQEGKMAGIFQFESSGMQNYMTRLQPTQIGDIIAMS
ALYRPGALNARIDENRNAVDLFVDRKHGRESIDYMHPMLEEILKETYGVIVYQEQVMQIS
QVMGGFSMAKADNLRKAMGKKMPEIMEQFKADFVSGGVAQGVHDTLATRVFELMAEFAGY
GFNKSHSAAYGVLAYWTGYLKAHYTAEFMTAILNSEIGDTDRMKHLTDEAKSFGIMTLPP
SINKSDTLFAIEDDKGKPCIRVGLSAIKQVGGAARAVVTSRLRKKRDFLNLFDLTASVDL
RVMNRKALECLILAGSFDELDSNRAKLLANVDKAIKFGQMQNRSVTLGQCGFFTSEAGGT
GEDVHYPDLDPADPMPESEKLLQEKKLVGFYLSRHPLSPYHRDWEAFATLQLNAKEVTPA
RQYKVIGLIVSIKPHQDRKGKAMLFGALEDFTGKADFTVFSSVFEQYGHLIKPEEVVMLV
AEAEVSGGMLKLLVREVIPIKKVRNSLIKKIILKIDADEQGQLGKLVQLKKLFETHRGGT
PVDFEVRALVGENIETLSMFARGTPVDASDTTLEKLEEILGPDNVRITG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgtgcatcttcatgttcatacccactactcgatgcagagcagcccggttttt
cccggcgagcttttttccgcatgccgccagctcgggatgaagagtgtggcggtaaccgat
tactgctcgattttcaatatgccggagcttttcagcgacgccaagaaagctgatgtcaag
ctgataatcggcactgagcttttcctgcttgaatcggccactcattcacaggcgaaaaac
actttttctccttcaatcatactgctggttcagagcgaagcgggctacagaaatctgtgc
gtactgctctcgcgagcatccagggagggatttatcaacgggacgcctcatctcgagtcg
aggcttctggaagatcaccacgatggtcttatctgtctttccgcctacagttccggaaga
attggccgggcattgcttgcaggctccctccatgaagcggaaaccgttactggctactac
aaggatatttttggggataatttctatctcgaactgcagcgtcatgcaacatcgttcgat
gataagctcaatgcagcaaccattgcgctcgccgaaaaattttccgtggaactggttgcc
accaataacgtccactatctggatcgtaaagattccggttgttatcgggcgatgattgcc
aatcgcaccaaagaaaaactttcaagccagaatcttcaggctcttcccggcagtgaacac
tatctgaaaactgccgaggagatggcccggatttttccggataatggcagtgcgcttgca
aacagtgcgaggattgccgagaaatgcacctatgtctttaaaaagaaggagcctattctg
cctcattaccgtctgccagacgggtttgacgatgaggcgaagtatcttcgtcacctgacc
tgggaaggagccgcagagaagtatgccggttcggaggctgacgggatcactgaagaggat
gttcgggcacgcatagaacttgagcttggtgtgatcgagaagatggggttcagttcctac
tttcttattgtcagtgacctgatttccgcatcgagacggatgggttattcggtcggtccg
ggcaggggttccgctgcaggcagtatcgtggcttatctgaccggaataaccagaatcgac
ccacttaagtacaagctgcttttcgagcgctttctcaatccggaacgtctctcgatgccc
gatatcgacatcgattttacaccggtcggcaagcagaaggttcttgaatataccgttgaa
aagtatggcgaccagagcgtggcgaaggtggttgctatcggtacgcttggcgccaaggca
gccattcgtgatgccgggcgtgtgcttgaagttcctctgccgattgtggaccggctcgca
aaacttgtacccacaaagcctggtatcacgcttgaaaaggctatcagcgaagtcagggat
ctgaagcagtttgtcgagagttctccggaaaatctgaaacttcttgaatacgcaagagcg
ctcgaaggcagggctcgtaatgtgtcaatgcatgccggtgcggttgtcattaccgatggt
cctcttgaagagcaggtgcccctctatgtttcaaacaagatcgagactgaggtaagaaag
tatgccgacgagatcgatctcgacgagaccgttcagatcggagtcaagggcgcagacggt
gtcgatgaaaagcagatcgttacccagttcgacaagaactggattgaaactgccggtctc
ctgaaaatcgactatctgggtctggaaactcttgccgtgatcgatgagaccctgcatctc
atccggagacggcacaacatcgatatcgatctggagaaggtgccgatgaacgatcgtaaa
accttccgtatctttcaggagggcaagatggccggtattttccagttcgaatcgtcaggc
atgcagaactatatgacccggcttcagccgacgcagatcggtgatattatagccatgagc
gcgctctatcgtccaggagcgctgaacgcgagaatcgacgagaatcgcaatgccgttgat
ctgtttgttgacaggaagcatggcagggagtctatcgattacatgcatcccatgcttgag
gagattctgaaagagacctacggggtcattgtctatcaggagcaggttatgcagatatcc
caggtgatgggaggcttttcgatggccaaggcagacaatcttcgcaaggcaatgggcaag
aaaatgcctgaaatcatggaacagttcaaggctgattttgtcagcggcggcgttgctcag
ggggttcacgatacgcttgccacccgggtattcgaactgatggcagagttcgccggctac
ggcttcaacaaaagtcactctgcggcatacggcgtgcttgcctactggacagggtatctc
aaggcgcattatactgcggagttcatgacggcaattctcaacagcgagattggcgatacc
gaccggatgaaacatctcaccgatgaggcgaagagcttcggcattatgacgcttcctcct
tcgatcaacaaaagcgatacgctttttgccatagaggacgacaagggaaaaccctgtatc
cgggtcggactgagcgctatcaagcaggtcggaggcgcagccagagcggttgttacttcg
aggctgcggaagaaacgggattttctgaatctgttcgatcttaccgcatcggtcgatttg
cgcgtcatgaaccggaaagcacttgaatgccttattcttgccgggtcgtttgacgaactc
gattcgaaccgggcaaaactgcttgccaatgtcgataaggccatcaagttcgggcagatg
cagaaccgttccgttactctcgggcagtgtggattttttacttccgaagccggcggtacc
ggagaggatgtgcactatcccgatctcgatcccgccgatccgatgcctgaatccgagaaa
ctgcttcaggaaaaaaaacttgtcggtttttatctgagccgccatccgctgtcgccctat
catcgcgactgggaagcatttgcaaccctgcagctcaacgccaaggaggttactccggca
agacagtacaaggtgatcgggctgattgtttccattaaaccgcatcaggaccgcaaaggg
aaggcgatgctgtttggcgctctggaggattttaccggaaaggcagatttcaccgttttt
tccagtgtttttgaacaatacggccatctgataaaacccgaagaggtcgttatgctcgtt
gcggaggcagaggtcagtggaggtatgctcaaattgctggttcgggaggttattcccatt
aaaaaggtacggaacagcctgataaagaaaatcattcttaaaatcgatgccgatgagcag
ggacaactcggaaaactcgtgcaactgaaaaaactttttgaaacccatcgggggggaact
ccggtcgattttgaagtccgggctttagtcggtgaaaatatcgaaacgctcagcatgttt
gcccggggcactccggttgatgcgtccgatactacgctggaaaagctggaggaaattctg
gggcctgataatgtgagaattaccggttag
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integrated database retrieval system
