Chlorobium limicola: Clim_0918
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Entry
Clim_0918 CDS
T00766
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
cli
Chlorobium limicola
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cli03000
]
Clim_0918
03036 Chromosome and associated proteins [BR:
cli03036
]
Clim_0918
Transcription factors [BR:
cli03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Clim_0918
Chromosome and associated proteins [BR:
cli03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Clim_0918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
HTH_IclR
HTH_5
HTH_Crp_2
Fe_dep_repress
HTH_20
DUF7343
MarR_2
HxlR
NirdL-like_HTH
Crp
HTH_9
TrmB
HTH_Mga
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ACD89997
UniProt:
B3EIQ6
LinkDB
All DBs
Position
1001336..1001863
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AA seq
175 aa
AA seq
DB search
MSGHLDLIDLKIIESLGENGRLRLSELAEVVALSIPSVSERLDKLQKNGIIRSFTMEVDE
RQLGFDIQAFVRVRIDSSKHYKSFMEHVLQEDEIMECFSVTGEGSHILKVMTHNTSSLEK
FLSRIQSWPGVLETNTSFVLSQLKRTRKISAEIVRNNLQDRQVLITFDEKKSRKV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacatcttgacctgatcgatcttaaaattatcgagtctcttggcgaaaacggc
aggttacgtttgagcgagcttgccgaagtcgtggctctttcgataccgtcagtcagcgag
cggctcgacaagctgcagaaaaacggtattattcgcagttttaccatggaggtagacgag
cggcagcttggttttgatattcaggcatttgtgcgggtaagaatcgattcttcgaagcat
tacaagtcgtttatggagcatgtgcttcaggaagacgagatcatggagtgcttttctgtt
accggtgaggggtcacatattctcaaggtcatgacgcacaacacctcttctctcgaaaaa
tttctctcccgcattcagagctggccgggcgttctcgaaacaaacacgagtttcgtgctt
tcgcaactgaagcgaacgagaaaaataagcgcggagattgtccgtaacaatcttcaggac
agacaggtattgattacatttgatgaaaaaaaatcaagaaaagtatag
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