Chlorobium limicola: Clim_1208
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Entry
Clim_1208 CDS
T00766
Name
(GenBank) 8-oxoguanine DNA glycosylase domain protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cli
Chlorobium limicola
Pathway
cli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clim_1208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1208
Enzymes [BR:
cli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Clim_1208
DNA repair and recombination proteins [BR:
cli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Clim_1208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Ogg-HhH
PRRSV_Env
Motif
Other DBs
NCBI-ProteinID:
ACD90275
UniProt:
B3ECK0
LinkDB
All DBs
Position
complement(1306620..1307558)
Genome browser
AA seq
312 aa
AA seq
DB search
MSYQSLLLTDIPVNIEDSLFSGQSFSWNRLSFKDNFFISVINNVPVVINQINNYFINIYT
PDKFIGGIPVSEALSAYFTLDIDNGKLFDDHFIKRFPAIATLLQEYMGLKLLRQDPFETT
ITFMCAQGIGMALIRRQIGMLCEKYGTPCTIELMGQKHRIFRFPKPEMLAETSVLSLQAC
TNNNYRRALNIRRVAAAAAEGTLDFTISGSQSLSLDRIRAMLCEYDGIGPKIADCIALFS
LGRFDAFPVDTHVRQYLAEWFGIRRASMSLTEKNYLRLQDEVRTILRPEVAGYAGHLLFH
CWRRKVKHLRTA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagttatcaatcattattacttactgatattcctgttaatattgaagattctcttttt
agcggacaatctttttcatggaacaggttatcctttaaagataatttttttatctctgta
atcaataatgttccggtggttataaatcagataaataattattttataaacatttacacg
ccagataaatttataggtggcatacctgtttctgaggcactaagtgcttatttcactctg
gatattgacaacggaaaactgtttgatgatcattttataaaacggtttccagcaatcgca
acactgttgcaggagtatatgggattgaagctgctccgtcaggatccgtttgaaacaacc
ataaccttcatgtgtgctcagggaatcggtatggcgctgatacgccgacagattggtatg
ctttgtgagaagtacggcactccgtgtaccatcgagttgatggggcaaaaacatcgcatc
ttccgctttccgaaaccggagatgcttgctgaaacctccgtgttgtcgctgcaggcatgt
accaacaacaattaccggagagctctcaacatcaggcgtgttgccgcggcggcggcggaa
ggaacgcttgactttacaatatccggctcgcaatcgctctcccttgacaggataagagcg
atgctctgtgaatatgacggcataggtccgaaaatcgctgattgcatcgcgctcttcagc
ctcggtcgtttcgacgcatttcctgtcgacactcatgtacgtcagtatctggctgaatgg
ttcggcattcgaagagcctcaatgtcgttgactgaaaaaaactatctcaggcttcaggat
gaggtacgcaccatcctcaggccggaagtggccgggtatgccggtcatctgctctttcat
tgctggcgcagaaaagtcaagcacctcagaacagcgtga
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