Chlorobium limicola: Clim_1360
Help
Entry
Clim_1360 CDS
T00766
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cli
Chlorobium limicola
Pathway
cli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clim_1360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1360
Enzymes [BR:
cli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Clim_1360
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clim_1360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACD90420
UniProt:
B3ECZ5
LinkDB
All DBs
Position
complement(1458305..1461538)
Genome browser
AA seq
1077 aa
AA seq
DB search
MTLHLYTGNRMETLVDALAEVLRRNPPSVFEPEKIVVQSRGMQRWISMELARRFGVWAGA
EYPFPNRLLQQLFEEMELTQPDSEKFSKETMCWTLMRLLPEMLDRELFSPLRSYLRNDRE
GLKLFQLSGRIADTFDQYTLFRTDLLAAWEEGRNDGARDWQPELWRALVAESSGKHRGRL
KTEFCLKVRHAPLPAAFPKRISLFGISYMPPYHIGMIEALATRIPVNIFLLSPTQEYWSD
IVSRRKLFRMSEGERELSTEGNPLLASLGRSGREFADLLLEAGGIENEHDLYIEPADDTL
LHALQSDMLNLSGTGEEGERRSSPDPADRSVQVHSCHNPLREVEVLHDNLLDLLEHLPGL
EPRDIVVMTPEIEIYAPYIATVFGVSGEGVPRLPHSIADRRMLDEGGIAPALLKLLELYG
SRLPAPEIFDLLSSPPVSRRFRLDEEELDTIRVWVADTRIRWGMDERSRSGLGLPPFREN
SWRAGLERLLLGYAMPDEGVLSDGVLPFDVEGDAETLGKLADFIDAVDALSARFDRPRTL
DGWRDHFIWMLDTFIDADEEVERELSHIAAEIDRLTELAAEANFGGETAAPVMIAWLRGR
LEKFEMGLGFMTGGITFCAMLPMRSIPFRVVAMIGMNDGAFPRQQRLPGFDMMSREPRKG
DRSVRGDDRYLFLESILSARDVLYLSYVGQSIRDNTPQPPSVLASELLDAIERGFAFPEG
EDAISRMVVRHRLQGFSPAYFTEGSPLFSYSADNFLALERRHERNAGNGSRGRNPVEARP
FMDEPLPEADDGDRRVTIDDLVKFFANPSAFFLDRQLGLKPSAALRPLEEREPFGADGLD
AYLMRQELLAAVLEGGKEEALLPLFRSRGLLPPARHGELLFGELLAEVREFADRLPELKG
SAAPAVLEADLDIGGFRLTGTLDHLLPSGQLLYRCAKMREKDRIGSWILHLVLGACSPGH
MQETRLVMLDRAVRYTPVADAAGRLETMLSLYRQGLMEPLPFFPRASTAWAGKAEKTERE
RTEAALAAWREGYGGREGEGADPAFRRCFGTEPPLGERFAAIAEEVLLPMLEHGGKG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcatctctataccggaaaccggatggaaacgcttgtcgatgcgctggcggaa
gttctgcgtcgcaacccgccatccgttttcgaacccgagaaaatagtggtgcagagtcgc
ggcatgcagcgatggatttccatggaacttgcccggcggttcggcgtctgggccggtgcg
gagtatccctttccgaacaggctgctgcagcagcttttcgaggagatggaactgacgcag
cccgattcggagaagttttcaaaagagacgatgtgctggacactcatgcgcctcctgcct
gagatgctcgatcgtgagttattttcgccccttcgctcctacctgcggaacgaccgggag
gggctcaagctctttcagctctccggccgcatcgccgataccttcgaccagtacaccctt
ttccgtaccgaccttctcgccgcatgggaagaggggcgaaacgacggggcccgcgactgg
cagccggaattatggcgggcgctggttgcagagagttccggcaagcatcgtggccgtctg
aaaaccgagttctgcctcaaggttcggcacgcgccgcttcctgccgcctttccgaagcgg
atttctctcttcggcatctcctacatgccgccctaccatatcgggatgatcgaagccctg
gcgacgaggataccggtcaacatcttcctgctgagcccgacgcaggagtactggtcggat
atcgtttcccgcagaaagctcttccggatgagcgagggcgaacgggaactgagcaccgag
ggcaatccgctgcttgcctcgctcggcagaagcggccgggagttcgccgatctcctgctc
gaagccggcggaatcgaaaacgagcacgacctttacatcgaacccgccgacgacaccctc
ctgcacgccctgcagtccgacatgctcaacctcagcggtacgggggaggagggggagcgc
cgttcctcgccggatcccgccgatcgttcggttcaggttcactcctgccacaatccgctg
cgcgaggtcgaggtgctgcacgacaacctgctcgatcttctcgaacatcttcccggactg
gaacctcgtgatatcgtcgtgatgacgcccgagatcgagatctatgccccttacatcgcc
acggttttcggtgtttccggcgagggcgtaccgcgcctgccgcattcgatagccgaccgc
cgcatgctcgacgagggtggcatcgctccggccctgctgaagctgctcgagctctacggc
agccgtctccctgctccggagattttcgatctgctctcttcgccgccggtgagccgacgc
ttcaggctcgacgaagaggaactcgatacgattcgcgtctgggtagccgatacgcgaatc
cgctggggtatggacgaacgttcgcgaagcggcctcggcctgccccccttccgcgaaaac
tcctggagggcggggctcgagcggctgctgctcggctatgccatgccggacgagggggtg
ctctcggacggggtgctgccgtttgacgtcgagggcgacgcggaaaccctcggcaagctc
gccgatttcatcgatgccgtcgatgcgctctcggcaaggttcgatcggccacgcacgctc
gacggatggcgggatcatttcatctggatgctcgacacctttatcgacgccgatgaggag
gtcgaaagggagctctcgcacatcgccgccgaaatcgacagactgacggaactcgccgca
gaggccaatttcgggggcgagacggcggccccggtgatgatcgcctggctgcgcggccgt
ctcgaaaagttcgagatggggcttggcttcatgaccggcggcatcaccttctgcgccatg
ctgccgatgcgcagcattccgttccgcgtggttgccatgatcggcatgaacgacggggct
ttcccccgccagcagcgtctgccgggtttcgacatgatgtcgagggaaccgcgcaagggt
gaccgctccgtccgcggcgacgaccgttacctctttctcgaatcgatcctctctgcacgc
gacgtcctctacctgagctatgtcggccagagcatcagggacaacacgccacagccgccc
tccgtgctggcgagcgaactgctcgatgccatagagcgcggtttcgcatttccggaaggg
gaggacgcgatatcgcgcatggttgtccggcacaggctccaggggttcagtcccgcatac
ttcaccgaagggtcgccgcttttcagctactcggccgataacttcctggcgcttgaacgt
cgccatgagcgcaatgcaggtaatgggagcagggggcgaaatccggttgaagcccgtccc
tttatggacgaaccgcttcctgaggctgacgacggggatcgccgggtgacgatcgacgat
ctggtgaagtttttcgccaacccctcggcattctttctcgaccggcagctcgggctcaaa
ccctctgcagcgcttcgtccgctcgaagagcgcgagcccttcggcgccgacggcctcgac
gcatacctgatgcgccaggaactgcttgcagcggtgctcgaagggggaaaagaagaggct
ctcctgcccctgttccggtcgagaggtctcttgccgccggcccgacacggcgaattgctc
ttcggagagctgcttgccgaggtgagggagttcgccgacaggcttccggagcttaagggg
agcgctgcgcctgccgtacttgaagccgatctcgacatcgggggattccggctaaccggc
acgctcgaccatcttctgccctccgggcagctgctctaccgctgcgcgaagatgcgggag
aaggatcgcatcggttcatggattctgcacctcgtgctcggtgcgtgcagtccgggtcat
atgcaggagacccgtctcgtcatgctcgaccgtgccgtcaggtacactcccgtagccgac
gcggcaggcaggctcgaaaccatgctctcgctttaccggcaggggctcatggagccgttg
cccttcttcccccgcgcctcgacggcctgggcaggcaaggcggaaaaaacggagcgcgag
cgtaccgaagccgccctggccgcatggcgtgaagggtacggcggacgcgaaggcgagggt
gccgatccggccttccgccgctgtttcggcacggagccgcccctcggcgagcgctttgca
gccattgccgaagaggtgttattaccgatgcttgaacacggagggaagggatga
DBGET
integrated database retrieval system
