Chlorobium limicola: Clim_1364
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Entry
Clim_1364 CDS
T00766
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cli
Chlorobium limicola
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1364
Enzymes [BR:
cli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Clim_1364
DNA repair and recombination proteins [BR:
cli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Clim_1364
Prokaryotic type
Clim_1364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACD90424
UniProt:
B3ECZ9
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All DBs
Position
1464809..1466230
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AA seq
473 aa
AA seq
DB search
MSDNLTIHWFRQDLRLEDNPSLYYAALKGSVLPVYILDDRNAGDFRMGGANRWWLHHSLE
SLNRSLQGRLTLLMGDPLEILPALAASTGATKVYWNRCYEPWRISRDTRLKHKLREQGIT
AESYNGSMLWEPWEVHKSDGTPYKVFTPFYRKGCLSAASPRMPLPLPVKLDCPSPPEESL
PLEALGLLPRIRWDRQLEPHWTIGENGALERLAIFLKHGLPGYREGRDFPARPNVSRLSP
SLHFGEISPNQAWHGAIAAGSGIDLDHFQSELAWREFSYSLLYHNPGLPEKNLQKSFDRF
PWEENPAALMRWQQGLTGYPIVDAGMRELWQTGYMHNRIRMVAGSFLVKNLLLHWHEGES
WFRDCLADADLAINSASWQWIAGCGADAAPYFRIFNPVTQGQKFDADGSYTRRYLPELAR
LPDRYLFSPWEAPVSVLADAGIATGKTYPEPIVDLKSSRRQALEAYALTRNHS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacctgaccatacactggttccggcaggatctccgtcttgaggataaccct
tcactctattatgccgcactgaaagggagcgtactgccggtctatattcttgacgaccgc
aacgccggcgatttccggatgggtggagcaaaccgatggtggctgcaccacagcctcgaa
tcgctcaaccgttcgctgcagggacgcctcaccctcctgatgggagatccgctggagata
ctccctgcgcttgccgcatcgactggagcgacgaaagtttactggaatcgctgctacgag
ccctggagaatcagcagggacacaaggcttaaacataaactcagggaacagggtattact
gctgaaagctacaacggctcgatgctctgggaaccatgggaagttcataaatccgacggc
actccatacaaggtgttcactcccttctacagaaaaggatgcctctctgccgcatcgcca
cgcatgcctctgcctctcccggtcaaacttgactgcccgagcccacctgaagaaagcctt
ccgcttgaggcgctcggactgcttccccgcatacgctgggaccgacaacttgaaccccac
tggacaattggcgagaatggggctctcgaaagacttgctatctttctgaaacatggactc
cctggatacagggagggacgtgacttccctgcccgaccgaatgtttcaaggctctcaccc
tcccttcatttcggggagatctctccaaatcaggcatggcacggggcaattgccgcagga
agcggcatagacctcgaccattttcagagtgagcttgcatggagggagttttcatacagt
ctgctctaccacaatcccggacttcccgaaaaaaatctgcagaaatcgttcgaccgcttt
ccatgggaggaaaaccctgcagcacttatgcgctggcagcaaggattgacaggctacccc
atcgtggacgccggcatgcgtgaactttggcaaacaggatacatgcataaccgtatacgc
atggttgcgggatcgtttctcgtcaagaacctgctgctgcactggcacgaaggcgaatca
tggttccgggactgtctggccgatgccgaccttgccatcaacagcgcgagctggcagtgg
atagccggatgcggtgccgatgcggcgccgtacttccgcatcttcaatccggtaacgcaa
ggacaaaaattcgatgctgacggcagctatacgcgcaggtatctccccgaactggcacgt
cttcctgaccggtatctgttctctccctgggaagcgcccgtcagcgttctcgctgacgcg
ggaatcgcgacaggaaaaacctatccggagccaatagtcgatctcaagagctcgcgtcgg
caggcactcgaagcatatgcactcacacggaatcattcataa
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