Chlorobium limicola: Clim_1412
Help
Entry
Clim_1412 CDS
T00766
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
cli
Chlorobium limicola
Pathway
cli00920
Sulfur metabolism
cli01100
Metabolic pathways
cli01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Clim_1412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1412
Enzymes [BR:
cli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Clim_1412
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Clim_1412
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Clim_1412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Glyco_trans_4_5
GLUCM-like_C
DUF1802
Motif
Other DBs
NCBI-ProteinID:
ACD90472
UniProt:
B3ED47
LinkDB
All DBs
Position
complement(1517711..1518772)
Genome browser
AA seq
353 aa
AA seq
DB search
MIVPGYGRKLDLKEWSPVIEALLDGRHFVLTTHENSDGDGLGSEVALALVLRQLGRTVSI
VNPTEVPPNYTFLKKAGGIVLFDGRDEGAIQELSLSDVVVVLDANLAERIGSLRPHVQFA
KELGGMKVLCIDHHLDPEDFADIMICEQYASSTGELVYDLILALEEKTDRKLLTPEVANA
LYTAVMTDTGSFRFPKTTPYVYRLAGDLVDKGADPSLIYDRVYNSLTPQALKLLGAALSA
ITIYDDGMIASLFISQEMMKSTGSKLFDTDLIVTYLLSVPSVQISVLMVEMMDGRVKASF
RSRGNIYVNHLARTYGGGGHMNAAGCLLQFSAEKARKVIPEAVRAFLNAHHSA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatagtaccgggatatgggcgtaagcttgatttgaaggaatggtctccagtaattgag
gctctgcttgatggtcggcattttgtgctgacaacacatgaaaattctgatggagacggt
cttggcagcgaagtcgctcttgctctggttctaaggcagcttggtcgaaccgtttcgatt
gtcaatcccacggaagttccccctaattatacgtttctcaagaaagcaggcggcattgtg
ctttttgacggccgtgatgaaggcgctattcaggagctctcactcagcgacgttgtggtt
gtgctcgatgcgaaccttgccgagcggattggttcgcttcgtcctcatgttcagttcgca
aaagagcttggaggaatgaaggtactctgtatcgatcatcacctcgatccggaagatttt
gcagatatcatgatctgtgaacagtatgcatcctctaccggtgaactcgtttacgatctt
attctggctctcgaagagaaaacagacaggaaactgctcactccggaggttgcgaatgcc
ctctataccgcagtcatgaccgataccggttcgttcagatttcccaagacaacgccttat
gtgtaccgtcttgccggtgatcttgtcgataaaggtgcggatccgtcgctgatctatgac
agggtttataactcactgaccccccaggcactcaaactgcttggtgcggccctgagcgcg
atcaccatttatgatgacggcatgatagcctcactctttatttcacaggagatgatgaaa
tcgaccggcagtaaactctttgataccgatctgatcgtaacatatcttttaagcgttccg
tcagttcagatttccgtgctcatggtggaaatgatggatggaagggtaaaagcgagtttc
aggtcgagagggaacatctatgtcaaccatcttgccaggacctatggaggtggtggccat
atgaacgcggcgggctgtcttttacagttttcggcagaaaaagccaggaaagtcattccc
gaagccgtaagggcatttctgaacgctcatcattcggcatag
DBGET
integrated database retrieval system
