Chlorobium limicola: Clim_1445
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Entry
Clim_1445 CDS
T00766
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cli
Chlorobium limicola
Pathway
cli03030
DNA replication
cli03430
Mismatch repair
cli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clim_1445
03430 Mismatch repair
Clim_1445
03440 Homologous recombination
Clim_1445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cli03032
]
Clim_1445
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1445
Enzymes [BR:
cli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clim_1445
DNA replication proteins [BR:
cli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Clim_1445
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Clim_1445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
PP-binding
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACD90504
UniProt:
B3ED79
LinkDB
All DBs
Position
complement(1551224..1551868)
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AA seq
214 aa
AA seq
DB search
MQRTLADSVVVLDFETTGLSPQYGDRAIEIGAVLVEHGEIVDRFQKLMNPGFRISSFIEG
YTGITNEMLKGQPCCEEVMAEFSGFIAGRNIVAHNASFDRRFLDFELKRAKRVYEGACCC
SLLVSRRIYQDSPNHRLQTLVTHAGIPETGSFHRALADAEMTALLWMSMIDRIRRQYGIS
AITFDQLSDLSKIDKLYTHRYLTALAEELLRKEE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggacgttggcggacagtgtggtggttctcgatttcgagacgacgggcttgtcg
ccgcagtatggcgaccgggctatcgagatcggtgcggtgcttgtggagcatggggagatt
gtcgatcgttttcaaaagctgatgaatcccgggttccggatcagttcgtttatcgagggt
tataccggcatcaccaatgagatgctgaaagggcagccttgctgcgaggaggtgatggcc
gagttttcggggtttatagccggtcgtaatatcgtcgcgcacaatgcttcattcgaccgc
cgttttctggatttcgagctgaaacgggcgaaacgggtatatgaaggcgcctgttgctgc
tctctgctcgtttcgagaaggatttatcaggactctccgaaccacaggctgcagacgctg
gtgacgcatgccggtattccggagaccggaagttttcaccgcgcgctggcggatgccgag
atgacggcgctattgtggatgtcgatgatcgacaggattcgccggcaatacgggatttcg
gcgattaccttcgatcagctgagcgatctctcaaaaattgataagctctatacccacagg
tatcttaccgccctggcagaggaactcttgagaaaggaggagtga
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