Chlorobium limicola: Clim_1635
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Entry
Clim_1635 CDS
T00766
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cli
Chlorobium limicola
Pathway
cli00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Clim_1635
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cli01007
]
Clim_1635
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cli03016
]
Clim_1635
Enzymes [BR:
cli01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Clim_1635
Amino acid related enzymes [BR:
cli01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Clim_1635
Transfer RNA biogenesis [BR:
cli03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Clim_1635
Prokaryotic type
Clim_1635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
ACD90679
UniProt:
B3EDX7
LinkDB
All DBs
Position
complement(1767040..1769454)
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AA seq
804 aa
AA seq
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MKISVNWLKKFIPSFSPDIPALVEKLTFLGLEVEDVLGCRQLDERIVVGRIEEVDRHPDA
DRLTVCRVNTGQGELLQIVCGAPNVASGMVVPVAMVGAKLGQPDGEAFSIKKSKIRGVQS
FGMICAADELGLSGDHTGVMVLDPASPLGAPVASLLDTDAILDIAVTPNRPDVLSHLGIA
RELALPEDIVIPERHMIDFAQTADLVEIRDREACPYYSAVAIRGVQVGESPEWLRQCLES
IGLKPKNNIVDITNYILHSLGQPLHAFDLGKLAGGRVVVRSDVSASFTAITQETCTVGPG
MPVICDSEKPAAIAGVMGGLDSAVTAGTTDILLESAYFTPSFVRKSAKKAGISSDSSYRF
ERGVDPLNVKRAAECAVSLILELAGGEIAAAQECGKEPSELLRLTLRPQRVNAMLGSSIE
PETMSSILAGIGFVHTATTAEGYMEFLVPSYRVDVTSEIDLVEEVARVYGYDNIQPSVQM
VTTYPESRRVPEYFPDYLRSLLIGLDFREVLTNPLIRRSEAALFDQCLISVLNPISEGLE
VLRPSLVPAFLKVIAHNIRYGNKDLKLFEVARGFIGKDLSEGNELPLEAFSEREYLVMAI
TGSRNPRLWNQPMEKTDFYDMTGSVGMLLEKLNLLDKSSLIAYNENTVGIELELTGGQGK
PRRYRAGVVQLIDAAVLGAFDIVGEVYIAELDTAVLQDCFASSITYEPPSRFPAVQRDLS
FILPLEVPVQSLVDVVRASDSLIRAVTVFDHFVRGDQEGGARSVALSLDIADYEGTLLDE
RINDILEKAGSSAGKKLGAVIRQV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatctgtcaactggctgaaaaagtttattccctccttttctcccgatattccg
gctcttgttgaaaagctgacctttctcggtcttgaagttgaggatgtgctcggttgccga
cagcttgacgagcgtatcgtagtcggcagaatcgaggaggtcgatcggcaccccgatgcc
gatcgactgacggtctgtcgggtcaataccggtcagggggaactgctgcagattgtgtgc
ggtgcgccgaatgtcgccagcggaatggtggtgcctgttgccatggttggtgcaaaactc
ggacagccggacggcgaggctttttcaatcaagaagtcgaaaatccggggagttcaatct
ttcggtatgatttgtgcagccgatgaactcggtctgtctggcgaccataccggcgttatg
gttcttgatcctgcaagtccgctgggcgcgcccgtcgcatccctgctcgataccgatgcg
atactcgatatcgcggtcacccccaatcgtcccgatgtgctttctcatctcggcatagcc
agagaactcgctctgcctgaagatatcgtcattcctgaacggcacatgattgattttgcc
caaaccgctgatctggtcgagatccgcgatcgggaggcatgtccctactattcggcagtg
gctatacggggcgtacaggtcggagagtcaccggaatggctgaggcagtgccttgaaagc
atcggcctgaagccaaaaaacaatattgtcgatattaccaattacattctccattcactg
ggacagccgctgcacgccttcgatctcgggaagcttgccggtgggcgtgtggtggttcgc
agcgatgtttcggcttcgtttacggcaattacccaggaaacctgcactgtcgggccggga
atgccggttatctgcgacagcgaaaaaccggcagccattgcaggggttatgggcggcctt
gattcggcagttacggcagggacaacagatattcttctggaatcggcttattttaccccc
tcttttgtcagaaaatccgcgaaaaaagccggaatatcatcggattcctcctaccgtttc
gagcgcggagtcgatcctctgaatgtgaaacgggcagcagagtgcgccgtttcgctcatt
ctcgaactggcgggcggcgagatagccgcagcccaggagtgcggtaaggagccgtcggaa
ttgctccgtctgacgttaaggcctcagcgggtcaatgccatgcttggcagctctatcgag
cccgaaacgatgagttcgatacttgccggaataggttttgttcatacggcaacgacggca
gagggatatatggagtttcttgtaccttcgtatcgggtcgatgtgacgtccgagattgac
ctcgtcgaggaagttgcacgagtttatggatatgacaacatccagccatccgtgcagatg
gttacaacctaccccgagtcccgcagggtgcccgaatattttcccgattacctcagaagc
ctgcttatcggtctggatttcagggaggtgcttaccaatccattgatcagaagatccgaa
gcggcacttttcgatcagtgcctcatttccgttctcaatccgatcagcgagggtcttgaa
gttcttcgcccttcgcttgtgccggcatttcttaaagtgattgcgcataatatccgttat
gggaacaaagatctcaagctgttcgaggttgcccgcggatttatcgggaaagacctttcg
gaggggaacgagttgcctcttgaggcgttcagtgaacgcgagtaccttgtcatggcgatt
accggatcacgtaatccccggttatggaatcagccgatggaaaaaacggacttttatgat
atgaccggttccgtcgggatgcttctggagaagctgaatttacttgacaaatcctcgctt
attgcctataatgaaaatacggtcggtattgagcttgaactgaccggaggacaggggaaa
ccccgaagataccgggccggggtggttcagttgatcgatgccgctgtactcggcgcattc
gatattgtcggggaggtgtatatagcagagctcgatacagctgtacttcaggactgtttc
gcctcatcgattacctatgaacctccatcaaggtttcctgctgttcaaagggatttatcg
tttattcttcctttagaggtacccgttcagtcgcttgttgacgttgtcagagcaagcgac
tccctgatccgggccgttacggttttcgatcattttgtccgcggcgatcaggagggaggg
gcgcgcagtgtagcgctctcgcttgatatcgccgattacgagggtactttactggatgaa
aggattaacgatattcttgaaaaagccggcagcagtgccggaaaaaaacttggtgcggta
attcgacaagtctga
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