Chlorobium limicola: Clim_1665
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Entry
Clim_1665 CDS
T00766
Name
(GenBank) outer membrane adhesin like proteiin
Organism
cli
Chlorobium limicola
Pathway
cli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clim_1665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
HemolysinCabind
VWA_2
Motif
Other DBs
NCBI-ProteinID:
ACD90707
UniProt:
B3EE05
LinkDB
All DBs
Position
complement(1822862..1831339)
Genome browser
AA seq
2825 aa
AA seq
DB search
MNTYGNTPVATAASVNGKIYVQQENGSKRILKAGDKIYEGDIIVSESGAKAVLRAENGTE
KTIEGNQSVQLSAVHFSNAAQPDLFEEQPEQHDKPSPRQIDSLHDQHHGFIRVSRIDETL
GEMPYRFVSVKGNYDPSADGRTAEYDAFVDGRATHDPRIAMDPLAIEYVEREEVVRQYTE
YAEDEKSNTRPSIGIPENQIVDEDDLDNSQSEGSDPEKETVVVSGSLDVIPAGEPLDTVF
NSTSSLPVLFSQGAPVQYEIINDGHTIRAYTDDGRTVFTVVINNPSDSNGEQSYTFTLDD
QLDHPDGQGENLLDIPFSFTVQDYNGDAVNGIFTVTVVDDVPVQTSTVVSGQVHEDALTG
QSTGNQAGESGKVVSASGFVTGLFTIGADESAVYSLQSITFPDTLTSQGSQLTTSVVGDT
LTAVRVSDGQTVFTLQVDAVTGSYTFTLVDQLDHPAGSDSSIPSSDLEQLTIDLSGTLKV
TDKDGDWQVSDAGSLVIRVEDDVPVQTSTVVSGQVHEDALTGQSTGNQAGESGKVVSASG
FVTGLFTIGADESAVYSLQSITFPDTLTSQGSQLTTSVVGDTLTAVRVSDGQTVFTLQVD
AVTGSYTFTLVDQLDHPAGSDSSIPSSDLEQLTIDLSGTLKVTDKDGDWLVSDAGSLVIR
VEDDVPVQTSTVVSGQVHEDALTGQSTGNQAGESGKVVSASGFVTGLFTIGADESAVYSL
QSITLPDTLTSQGSQLTTSVVGDTLTAVRVSDGQTVFTLQVDAVTGSYTFTLVDQLDHPA
GSDSSIPSSDLEQLTIDLSGTLKVTDKDGDWLVSDAGSLVIRVEDDVPVQTSTVVSGQVH
EDALTGQSTGNQAGESGKVVSASGFVTGLFTIGADESAVYSLQSITFPDTLTSQGSQLTT
SVVGDTLTAVRVSDGQTVFTLQVDAVTGSYTFTLVDQLDHPTGSDSSIPSSDLEQLTIDL
SGTLKVTDKDGDWLVSDAGSLVIRVEDDVPVQTSTVVSGQVHEDALTGQSTGNQAGESGK
VVSASGFVTGLFTIGADESAVYSLQSITLPDTLTSQGSQLTTSVVGDTLTAVRVSDGQTV
FTLQVDAVTGSYTFTLVDQLDHPAGSDSSIPSSDLEQLTIDLSGTLKVTDKDGDWLVSDA
GSLVIRVEDDVPVQTSTVVSGQVHEDALTGQSTGNQAGESGKVVSASGFVTGLFTIGADE
SAVYSLQSITFPDTLTSQGSQLTTSVVGDTLTAVRVSDGQTVFTLQVDAVTGSYTFTLVD
QLDHPAGSDSSIPSSDLEQLTIDLSGTLKVTDKDGDWQVSDAGSLVIRVEDDVPVQTSTV
VSGQVHEDALTGQSTGNQAGESGKVVSASGFVTGLFTIGADESAVYSLQSITLPDTLTSQ
GSQLTTSVVGDTLTAVRVSDGQTVFTLQVDAVTGSYTFTLVDQLDHPAGSDSSIPSSDLE
QLTIDLSGTLKVTDKDGDWQVSDAGSLVIRVEDDVPVQTSTVVSGQVHEDALTGQSTGNQ
AGESGKVVSASGFVTGLFTIGADESAVYSLQSITLPDTLTSQGSQLTTSVVGDTLTAVRV
SDGQTVFTLQVDAVTGSYTFTLVDQLDHPTGSDSSIPSSDLEQLTIDLSGTLKVTDKDGD
WLVSDAGSLVIRVEDDVPVQTSTVVSGQVHEDALTGQSTGNQAGESGKVVSASGFVTGLF
TIGADESAVYSLQSITFPDTLTSQGSQLTTSVVGDTLTAVRVSDGQTVFTLQVDAVTGSY
TFTLVDQLDHPTGSDSSIPSSDLEQLTIDLSGTLKVTDKDGDWQVSDAGSLVIRVEDDVP
VQTSTVVSGQVHEDALTGQSTGNQAGESGKVVSASGFVTGLFTIGADESAVYSLQSITLP
DTLTSQGSQLTTSVVGDTLTAVRVSDGQTVFTLQVDAVTGSYTFTLVDQLDHPVGSDSSI
PSSDLEQLTIDLSGTLKVTDKDGDWLVSDAGSLVIRVEDDVPVSSGSTTVGYVEEEALDG
GNDGDSDVSGIDGDSDGDNAVWSGTLSSLFGVGADDPGRYGLNGTPTGLPVLTSAGETVV
YDVTGDRLTAYVDSGSSTGALDGTDRVVFTFEITPIRPTCAAYEFTPVLTQIDHPDAAAD
NIETLKTIDLSGSVYGYDNDGDRIGLGTVTLVITVQDDVPIPTVVSESFTAKPIDTNLTI
ILDVSGSMNDVIPNSGGKTRLQFAKEAIASLINQYDALGDVKVQIITFSASAQPIIVSGQ
VWLDPGTAITQINGLSASGSTNYDDALVDVMTTYNNAGKLSTPQSQNVGYFLSDGVPNTP
ATSPGINSPEEQQWESFLTTNNINNYAIGVGAGATQATLDPVAYNGETNTERSANVVTQE
SQLGALLSSTVDPDSISGTLIQSTGADEDGYVKSISIDGTTYTFNPASGGSVTVSGTNRS
VFDTTTDRLTITTLKGSKLSVDMNTGEYLYTSPGTTVTVAFTDTFSFSISDADGDVVSST
GSITVNPPSIGNSTNENMSGGPNSDYIMGKGGNDTINGADGDDIIDGGDGVDSLNGGDGN
DVIVYDSADATINGGNGIDTLFVKGGSTIDFDPDLGALASIETLKLDVLAKVLDLAASDI
SSITSGGNTLTILGDATNGVQLSGSWGVGTPVTEEGVTYNVYTSGTATLKVQDGIYLLSV
GTGSAESLAGISSGSEDDWLTGLGGNDTLTGGGGNDLLDGGTGNDSLNGGDGNDTLVYDS
GDTGTGFINGGIGIDTLLLTGGTDLDFTGTTLSGRIDGIEIINLASDADSNTITNLDTND
VTGISGSSILYIIGGIGDSVSGSGFGSKDAENVSVLLNGKTYTMDMWNNGGVTLYVQDGM
ATSGL
NT seq
8478 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgtacggcaacacaccggtcgcgacggcggcttcagtaaacgggaagatttac
gtacagcaggaaaatgggtcaaaacgtatcctcaaggctggcgacaagatatatgaaggg
gatattattgtttccgagagtggggctaaagccgtgctcagggcagaaaacggaacggag
aagaccatcgaagggaaccagtccgttcagctttcggcagttcatttcagtaatgcagct
cagccagatctattcgaagagcagccagagcaacatgataaaccctcaccacgacagatc
gactctttacatgaccagcatcatggttttattcgtgtttcacgtatcgatgaaacactg
ggagaaatgccttatcgatttgtatcggtcaaagggaattacgatccgtcagcagatggc
agaacggcggaatatgacgcttttgttgacgggagagcaactcatgatccccgtattgca
atggatccgctggcgatcgagtatgttgaaagagaagaggttgtaaggcaatatacagag
tatgcagaagatgaaaaaagtaatacaaggccctcaataggcattcctgaaaatcagatc
gttgatgaagatgatctggataattcgcagtcggagggaagcgatcccgaaaaggaaact
gtagtcgtcagcggttcacttgatgttataccggcaggagagcctctcgatacggtattc
aactccacatcgtcgcttcctgttcttttttcacaaggagcgcctgtacaatatgagatc
atcaacgacggacacacaatcagggcctacactgatgatggacggacggtatttactgtt
gtcatcaacaatccttccgactccaacggagaacaatcctacacgttcactctcgatgac
cagcttgaccatcctgatggtcagggagaaaacctgcttgatattccattttcattcaca
gttcaggattataacggcgatgctgtaaatggaatttttactgtgactgttgttgacgac
gtaccggttcagacgagcacggttgtcagcggtcaggttcacgaagacgccctgacgggt
cagtcgaccggcaaccaggcgggcgagtcaggcaaagtggtatctgccagcggttttgtg
accggtctgttcacgataggcgcagacgaatcggccgtctacagtctgcagtcgatcacc
ttccccgatacgctgacctcgcaagggtcgcagttaacgacaagcgtagtcggcgacacg
ctgacggcggttcgggtcagtgacggccagacggtgttcacgctgcaggtagacgccgta
acgggctcctatacctttacgctggtcgaccagctcgaccatccggccggcagcgacagc
tcgataccctcaagcgaccttgagcagctgacgatcgacctgtcaggcacgctgaaagtg
acggacaaggacggcgactggcaggtatcggacgccggcagtctggtaatccgcgtagaa
gacgacgtaccggttcagacgagcacggttgtcagcggtcaggttcacgaagacgccctg
acgggtcagtcgaccggcaaccaggcgggcgagtcaggcaaagtggtatctgccagcggt
tttgtgaccggtctgttcacgataggcgcagacgaatcggccgtctacagtctgcagtcg
atcaccttccccgatacgctgacctcgcaagggtcgcagttaacgacaagcgtagtcggc
gacacgctgacggcggttcgggtcagtgacggccagacggtgttcacgctgcaggtagac
gccgtaacgggctcctatacctttacgctggtcgaccagctcgaccatccggccggcagc
gacagctcgataccctcaagcgaccttgagcagctgacgatcgacctgtcaggcacgctg
aaagtgacggacaaggacggcgactggctggtatcggacgccggcagtctggtaatccgc
gtagaagacgacgtaccggttcagacgagcacggttgtcagcggtcaggttcacgaagac
gccctgacgggtcagtcgaccggcaaccaggcgggcgagtcaggcaaagtggtatctgcc
agcggttttgtgaccggtctgttcacgataggcgcagacgaatcggccgtctacagtctg
cagtcgatcaccttacccgatacgctgacctcgcaagggtcgcagttaacgacaagcgta
gtcggcgacacgctgacggcggttcgggtcagtgacggccagacggtgttcacgctgcag
gtagacgccgtaacgggctcctatacctttacgctggtcgaccagctcgaccatccggcc
ggcagcgacagctcgataccctcaagcgaccttgagcagctgacgatcgacctgtcaggc
acgctgaaagtgacggacaaggacggcgactggctggtatcggacgccggcagtctggta
atccgcgtagaagacgacgtaccggttcagacgagcacggttgtcagcggtcaggttcac
gaagacgccctgacgggtcagtcgaccggcaaccaggcgggcgagtcaggcaaagtggta
tctgccagcggttttgtgaccggtctgttcacgataggcgcagacgaatcggccgtctac
agtctgcagtcgatcaccttccccgatacgctgacctcgcaagggtcgcagttaacgaca
agcgtagtcggcgacacgctgacggcggttcgggtcagtgacggccagacggtgttcacg
ctgcaggtagacgccgtaacgggctcctatacctttacgctggtcgaccagctcgaccat
ccgaccggcagcgacagctcgataccctcaagcgaccttgagcagctgacgatcgacctg
tcaggcacgctgaaagtgacggacaaggacggcgactggctggtatcggacgccggcagt
ctggtaatccgcgtagaagacgacgtaccggttcagacgagcacggttgtcagcggtcag
gttcacgaagacgccctgacgggtcagtcgaccggcaaccaggcgggcgagtcaggcaaa
gtggtatctgccagcggttttgtgaccggtctgttcacgataggcgcagacgaatcggcc
gtctacagtctgcagtcgatcaccttacccgatacgctgacctcgcaagggtcgcagtta
acgacaagcgtagtcggcgacacgctgacggcggttcgggtcagtgacggccagacggtg
ttcacgctgcaggtagacgccgtaacgggctcctatacctttacgctggtcgaccagctc
gaccatccggccggcagcgacagctcgataccctcaagcgaccttgagcagctgacgatc
gacctgtcaggcacgctgaaagtgacggacaaggacggcgactggctggtatcggacgcc
ggcagtctggtaatccgcgtagaagacgacgtaccggttcagacgagcacggttgtcagc
ggtcaggttcacgaagacgccctgacgggtcagtcgaccggcaaccaggcgggcgagtca
ggcaaagtggtatctgccagcggttttgtgaccggtctgttcacgataggcgcagacgaa
tcggccgtctacagtctgcagtcgatcaccttccccgatacgctgacctcgcaagggtcg
cagttaacgacaagcgtagtcggcgacacgctgacggcggttcgggtcagtgacggccag
acggtgttcacgctgcaggtagacgccgtaacgggctcctatacctttacgctggtcgac
cagctcgaccatccggccggcagcgacagctcgataccctcaagcgaccttgagcagctg
acgatcgacctgtcaggcacgctgaaagtgacggacaaggacggcgactggcaggtatcg
gacgccggcagtctggtaatccgcgtagaagacgacgtaccggttcagacgagcacggtt
gtcagcggtcaggttcacgaagacgccctgacgggtcagtcgaccggcaaccaggcgggc
gagtcaggcaaagtggtatctgccagcggttttgtgaccggtctgttcacgataggcgca
gacgaatcggccgtctacagtctgcagtcgatcaccttacccgatacgctgacctcgcaa
gggtcgcagttaacgacaagcgtagtcggcgacacgctgacggcggttcgggtcagtgac
ggccagacggtgttcacgctgcaggtagacgccgtaacgggctcctatacctttacgctg
gtcgaccagctcgaccatccggccggcagcgacagctcgataccctcaagcgaccttgag
cagctgacgatcgacctgtcaggcacgctgaaagtgacggacaaggacggcgactggcag
gtatcggacgccggcagtctggtaatccgcgtagaagacgacgtaccggttcagacgagc
acggttgtcagcggtcaggttcacgaagacgccctgacgggtcagtcgaccggcaaccag
gcgggcgagtcaggcaaagtggtatctgccagcggttttgtgaccggtctgttcacgata
ggcgcagacgaatcggccgtctacagtctgcagtcgatcaccttacccgatacgctgacc
tcgcaagggtcgcagttaacgacaagcgtagtcggcgacacgctgacggcggttcgggtc
agtgacggccagacggtgttcacgctgcaggtagacgccgtaacgggctcctataccttt
acgctggtcgaccagctcgaccatccgaccggcagcgacagctcgataccctcaagcgac
cttgagcagctgacgatcgacctgtcaggcacgctgaaagtgacggacaaggacggcgac
tggctggtatcggacgccggcagtctggtaatccgcgtagaagacgacgtaccggttcag
acgagcacggttgtcagcggtcaggttcacgaagacgccctgacgggtcagtcgaccggc
aaccaggcgggcgagtcaggcaaagtggtatctgccagcggttttgtgaccggtctgttc
acgataggcgcagacgaatcggccgtctacagtctgcagtcgatcaccttccccgatacg
ctgacctcgcaagggtcgcagttaacgacaagcgtagtcggcgacacgctgacggcggtt
cgggtcagtgacggccagacggtgttcacgctgcaggtagacgccgtaacgggctcctat
acctttacgctggtcgaccagctcgaccatccgaccggcagcgacagctcgataccctca
agcgaccttgagcagctgacgatcgacctgtcaggcacgctgaaagtgacggacaaggac
ggcgactggcaggtatcggacgccggcagtctggtaatccgcgtagaagacgacgtaccg
gttcagacgagcacggttgtcagcggtcaggttcacgaagacgccctgacgggtcagtcg
accggcaaccaggcgggcgagtcaggcaaagtggtatctgccagcggttttgtgaccggt
ctgttcacgataggcgcagacgaatcggccgtctacagtctgcagtcgatcaccttaccc
gatacgctgacctcgcaagggtcgcagttaacgacaagcgtagtcggcgacacgctgacg
gcggttcgggtcagtgacggccagacggtgttcacgctgcaggtagacgccgtaacgggc
tcctatacctttacgctggtcgaccagctcgaccatccggtcggcagcgacagctcgata
ccctcaagcgaccttgagcagctgacgatcgacctgtcaggcacgctgaaagtgacggac
aaggacggcgactggctggtatcggacgccggcagtctggtaatccgcgtagaagacgac
gtaccggtttccagcggtagcacgaccgttggttatgtcgaagaagaagcgcttgatggc
ggcaacgatggcgacagtgacgtctctggtatcgatggagacagtgacggcgacaatgcg
gtatggtcgggtaccctgagcagcctgttcggagtcggcgcggatgatcctggtcgatac
gggttgaacggcacgccgacgggacttcctgttctgacgtctgccggcgagacggttgtg
tatgatgtgacgggcgacaggttgacggcgtacgtcgacagcggctcctcgacgggtgcg
ctggacggtacagaccgggttgtgttcacgttcgagatcaccccgatacgaccgacgtgt
gctgcgtacgagttcacgcctgtgttgacccagatcgatcacccggacgcagcagcagac
aacatcgagacgctcaagacgatcgatctgtcaggatcggtgtacggttatgacaacgat
ggcgacaggataggtcttggcacggtaacgctggtgatcacggttcaggatgacgtaccg
atcccaaccgttgtaagcgaatcctttacagccaaaccgatcgatacgaatcttaccatc
atccttgatgtttcgggaagtatgaatgatgtgattccgaacagcggaggcaaaacacgc
ctgcagttcgccaaggaggctatcgcatcgctgataaatcagtacgatgctctcggtgat
gtcaaggtacagatcattaccttctccgcttcggctcagccgataattgtgagtggccag
gtttggctcgatcctggaacggcgataactcaaataaatgggctgtcggcatccggttca
acgaattacgatgatgctcttgtcgatgtgatgactacatacaacaatgcaggcaagctt
tcgacaccgcagtcgcagaatgtcggttatttcctttcggatggcgtgcctaacacccca
gcgacttcaccagggatcaacagtcccgaggagcagcaatgggaatcattcctgacaaca
aacaatatcaacaactatgctataggagttggtgcaggagctacccaggcaactcttgat
cctgtggcgtataatggagaaaccaatacagagcgttcggcgaatgttgttacccaggaa
tcccagcttggagcactactgtcaagtacggtcgatccggattccatttcaggaacattg
atccagtcaacaggcgcagatgaagatggatatgtcaagtccatatcgatagatggtaca
acatatactttcaatcccgcttccggtggctctgtaaccgtttcaggaacgaacagaagc
gttttcgatacgacgacagatcggttgacaattacaacgctgaaagggtcaaaattgtcc
gttgatatgaataccggagaatacctctatacgtcacctgggacgacggttacagtggca
tttacagacaccttcagcttctcgatcagtgatgcggatggcgatgtggtttcttcaacc
ggttcgattaccgtgaatcctccttcaatcggaaattcaaccaacgagaatatgtctgga
ggtccaaactctgattatatcatgggcaaaggaggaaacgacactataaatggcgcagat
ggcgatgatatcattgacggtggagatggcgttgattcactcaatggcggtgacgggaat
gatgtcatcgtgtatgattctgccgatgcaaccattaacggcggaaacggtatcgataca
ctgttcgtaaagggaggatccactatcgactttgaccctgatcttggcgctcttgcaagc
atcgagaccttaaagctcgatgttcttgccaaggtgctggatcttgcggcatcagatatc
tcttcaatcacttcgggtggcaatacgttgacaattctgggagatgcgaccaacggggtg
cagctgagcggctcctggggagtcggcactccggttactgaagaaggcgtaacctataac
gtgtacacaagcggtacggctaccctgaaagttcaggacgggatctatctgctgagcgtt
ggtacgggatcggcagaatcacttgccggaataagcagcggatccgaggatgattggctg
accggacttggcggaaacgatacgctgactggcggaggaggtaacgatcttctcgatgga
ggcacaggtaacgacagccttaacggtggcgatggcaacgatacgcttgtttacgatagc
ggggatacgggtacaggattcataaacggaggtatcggaatcgatacactgttgctgacc
ggcgggacagatcttgatttcactggtacaactctgtctggcagaatagacggcatcgag
atcatcaatcttgcttccgatgccgacagcaatacgattacaaatctcgatactaatgat
gttacaggtatttcgggctcttcaattctctacattatcggaggtattggcgatagtgta
tccgggagcggtttcggatcaaaagatgcagaaaatgtatcagtcctgctgaacggcaag
acctatacgatggatatgtggaataacggtggagtaacgctttatgtccaggacggtatg
gcaaccagcgggttgtga
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integrated database retrieval system
