Chlorobium limicola: Clim_1709
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Entry
Clim_1709 CDS
T00766
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cli
Chlorobium limicola
Pathway
cli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Clim_1709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1709
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Clim_1709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ACD90751
UniProt:
B3EEE1
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Position
complement(1880663..1883278)
Genome browser
AA seq
871 aa
AA seq
DB search
MSAKGVSEKEHSPMMRQYLDVKDRYPDYLLLFRVGDFYETFFDDAREVAAALNIVLTRRS
NEIPMAGFPHHASEGYIAKLVKKGYKVAVCDQVEDPAVAKGIVRREITDIITPGVTYSDS
ILDDRHNNYLCAIVFLRVGRQTVCGAAFIDVTTGEFRIAGLLPEDASVFLRSLHPAELLV
SAADRERSETLRHALPAGTAFTVLDEWLFREEQAGEILARQFRTHSLKGFGIHDNPAGQV
AAGVILHYLEETRQSSLQYITRITPLQSGDYMTLDLQTKRNLEIISSMQDGSINGSLLQV
IDRTRNPMGARLLRQWLQRPLLRAADITMRLDAVDELKKMKPFRESVCCDLGQISDLERA
LARIATLRAIPREVRQLGSALAVIPLLKQSFQDTVSKRLCSIADALMPLPDLVAMIESAV
DPEAGASMRDGGYIRKGYHQELDDLRQTASTAKERLLEIQQEERERTAIGSLKVQFNRVF
GYYIEISKANRDKVPPYYEKKQTLVNAERFTIPALKEYEEKILNAEERSLVLEQQLFQAL
CCRIAGHAEVIQENAALIAEIDCLAAYAVCADEYGYCKPLIAEHTGLRILNGRHPVLERI
LPADEPYIANDALFDDRQKMLMITGPNMAGKSSYLRQTGLIVLLAQAGCFVPAEQAEIGV
VDRIFTRVGASDNLASGESTFLVEMNEAADILNNATAKSLLLLDEIGRGTSTYDGLAIAW
SMCEYIHRQIGARTLFATHYHELAELEGLLPGVVNYNASVLESGDRVIFLRKIVRGASDN
SYGIEVARMSGMPSAVITRAKAILAGMEKRDIATPSSSGLSLQSMQISLFDEIDTRLRTA
IEVIDIDRMTPLDALVELKKLQGLVRTGNII
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaaggggtatcggagaaagagcattcgcctatgatgcgtcagtatctggac
gtaaaggatcggtatccggattatctgctgctgttcagagtgggtgatttttacgaaacc
ttttttgacgatgccagagaagttgccgcagctctcaatattgtgctgacgaggcgttcg
aatgagattcctatggctgggtttcctcatcatgccagcgaaggttatatagcgaagctg
gtgaaaaaaggctacaaggtcgcggtgtgcgatcaggttgaagatcctgctgtcgccaaa
ggaatcgtaaggcgggaaataaccgatatcataacgccgggtgttacgtacagcgacagc
attctcgacgacaggcataacaattatctttgtgccattgtttttttgcgtgtcggcagg
cagacggtatgcggagctgcctttatcgacgttactactggcgagttcaggatagcaggg
ctgcttcccgaagatgcctctgtttttctgcgttccctgcacccggcggagcttctggtt
tctgccgcagaccgcgagcgttcggaaacgttacggcatgccctgcctgcagggacagct
tttaccgttcttgatgagtggctgtttcgagaggagcaggcaggtgagatacttgcccgt
cagttccgaacccactccctcaagggtttcggtattcatgataatcctgccggtcaggtg
gcagctggcgtgatattgcattatcttgaggagaccagacagagcagtctgcagtacata
acgcgcatcactcctctgcaaagtggagattatatgactcttgacctgcagacaaagcga
aatcttgaaattatctcttcaatgcaggatggttcgatcaacggcagtcttcttcaggtg
atcgaccgaaccagaaatcccatgggagctcggcttttgagacagtggctgcagcgtccg
cttctccgggcagccgatataaccatgcggctcgatgcggtcgatgagctgaaaaagatg
aagcctttcagagagtccgtatgttgcgatcttggccagatcagcgatcttgagcgtgca
cttgcccgtatagcgaccttacgcgctattccccgtgaagttcgtcagcttggttcggcg
cttgccgtgatccccctgcttaagcagtcgtttcaggatacggtttcgaaacgtctttgt
tcgattgcggatgcattgatgccgcttcccgaccttgtcgctatgattgagagtgccgtc
gatccggaagccggagcatcgatgagagatggcgggtatatccggaagggttatcaccag
gagctcgatgatctccgtcaaaccgcatcaacggcaaaagagcgtctgcttgaaatccag
caggaagagcgtgaacgcacggcgatcggatcattgaaagtgcagttcaacagggtgttt
ggctactacattgaaatcagcaaagccaatcgggataaagtgccgccatactacgaaaag
aaacagacgctggtcaatgccgagcggttcactatacctgccttgaaggagtatgaggag
aaaattctcaatgccgaagagcggagtcttgtgctcgaacagcagctgtttcaggctctc
tgctgcaggattgccggtcatgccgaagttattcaggagaatgccgctctgatcgccgag
atcgactgtcttgcggcttatgccgtttgcgccgatgagtacggttattgcaagcccctg
attgcagagcataccggtctccgtattctcaacggacgtcatccagtgctggagagaatt
ctgcctgcggatgaaccctatatcgccaatgatgcgctgtttgacgatcggcagaagatg
ctcatgatcaccggtccgaatatggcgggaaaaagctcctatcttcgccagacgggtctg
atagtgctgctggcacaggcagggtgtttcgttccggcagaacaggcagagatcggtgtc
gttgaccggatttttacccgtgtcggggcttcggataatctggcgtcgggggagagcact
tttcttgtcgagatgaacgaagcggccgatattctcaataacgctacggctaaaagtctg
ctcttgcttgacgagattggtcgtggcaccagtacctatgacggattggctatcgcctgg
tcgatgtgcgagtatattcatcggcagatcggagctcgaacgctgtttgcgacacattat
cacgagcttgccgaacttgagggtcttctgcccggtgtggtaaactacaatgcatccgtt
cttgagagcggcgatagggttatttttctcagaaaaattgtgcgtggtgcgtcggataac
agttacgggatcgaagtcgccagaatgtccggtatgccttcagccgttattacaagggcc
aaagcgattcttgccggaatggagaagcgggatattgctacgccatcgtcatcgggattg
tccctgcagagtatgcagatcagcctgttcgacgagatcgatacccgcctgcgaactgca
atcgaagtgatcgacatagaccggatgacgcctcttgatgctcttgtcgaattgaaaaag
cttcagggacttgtcagaaccggcaacattatatga
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