Chlorobium limicola: Clim_1768
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Entry
Clim_1768 CDS
T00766
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cli
Chlorobium limicola
Pathway
cli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clim_1768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cli03400
]
Clim_1768
Enzymes [BR:
cli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Clim_1768
DNA repair and recombination proteins [BR:
cli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Clim_1768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACD90807
UniProt:
B3EEJ7
LinkDB
All DBs
Position
1943600..1944472
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AA seq
290 aa
AA seq
DB search
MKRVGAHVSIAGGVENAPLQASKIGAKAFALFTKNQRQWKSPELAALSIETFRRNCCDGG
FRPEHILPHDSYLINLGSPEPDKLDRSRNAFFDEMQRVERLGLKMLNFHPGSHLNQIEPD
ACLQLIAESVNMALDRSCCVTAVIENTAGQGTNLGRSFDDLACIIDHVEDKSRVGVCLDT
CHLFAGGYDIRTKEALDRTLDEFDRIVGIRYLKAMHLNDAKQPLGSRLDRHECIGKGAIG
IEAFTAIMQHPLLDELPLILETPDSDGWQEEIGLLYRLAEEQVKDVSTPP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtcggagcacatgtcagtattgcgggtggcgttgaaaatgctcctttgcag
gcatcgaaaataggagcaaaggcattcgcactctttacgaaaaaccagcggcaatggaaa
tcacctgaactcgccgccctttccatcgagacgttccggaggaactgctgtgacggcggg
ttcagaccggaacatattctgccgcacgacagctacctcatcaacctcggaagtcccgaa
ccggacaagctcgaccgttcccgtaacgcctttttcgacgaaatgcagcgggtcgaaaga
ctgggcctcaagatgctgaacttccaccccggaagccatctcaaccagatagagccggat
gcgtgtctgcagcttatcgccgaatccgtgaatatggcccttgaccggagctgctgcgtg
accgcagtgattgaaaacaccgccggtcagggaacgaatctcggaagaagctttgatgat
ctcgcttgtataatcgatcacgtagaagataaatcacgcgtaggggtctgcctcgacacc
tgccatctttttgcaggaggctacgacatcagaacaaaggaggcgcttgatcgcacgttg
gacgagttcgaccgtatcgtgggtatccgttacctgaaggccatgcatctgaacgatgcc
aaacagcctctgggaagtcgtcttgaccggcacgaatgcataggcaaaggcgccatcggc
atcgaagcattcaccgcaatcatgcagcaccctcttctcgacgagctgccgctcattctt
gaaactcccgattccgatggctggcaggaagagatcggcctgctctacaggcttgcagaa
gagcaggtcaaagacgtttcgacaccaccctga
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