Chlorobium limicola: Clim_1952
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Entry
Clim_1952 CDS
T00766
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
cli
Chlorobium limicola
Pathway
cli00860
Porphyrin metabolism
cli01100
Metabolic pathways
cli01110
Biosynthesis of secondary metabolites
cli01240
Biosynthesis of cofactors
Module
cli_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Clim_1952
Enzymes [BR:
cli01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Clim_1952
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ACD90984
UniProt:
B3EFM2
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Position
complement(2168642..2170063)
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AA seq
473 aa
AA seq
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MATNLAVKYSNPGPRYTSYPTIPSWSSDGVTQEQWKEAMVKGFNDSNETTGISMYIHIPY
CENYCYFCGCNAHRTQDHSFEEPYLEALQKEWQMYLDVFPGTLNVKELHIGGGTPTFFSP
ENLARLVENLFRTVNRMDNYMFSFETNPRSTSKEHLEALYRVGFRRMSFGIQDFDPVVQQ
EINRPQSFELVKEKVDLARQIGFTSVNFDLVYGLPKQTLATITDTIDKVMQLRPDRLAFY
AYGHNPHMYEGQRKFKEEDLPVGDVKQELYDKGRAMLESIGYHEIGMDHFALEGDSLYLA
AKDGSLHRNFMGYTENTTQMMIALGASSISDTWYAFAQNERGDQKYIEEINKGRFPILRG
HLLTDEDLVLRRHILNLMCRQETSWEDPKMYTEELDIARYRLEDMENDGLVVLLENGVRV
TEIGIPFLRNICMAFDARLWRSDSLSKAYNVSRDIQKEYIEKARQAKAQQQVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatctcgcagtaaagtacagcaatcccggtccgcgttatacaagctatccc
accattccatcctggagcagcgacggcgtaacccaggagcagtggaaagaggctatggtg
aaaggtttcaacgacagtaacgagaccaccggcataagcatgtacatccatattccttac
tgcgagaactactgttatttctgcggatgcaatgctcatcgcactcaggatcactcgttc
gaggaaccctatctcgaagcgctccagaaagagtggcagatgtacctcgatgtatttccc
ggaactctcaatgtaaaggaactgcatatcggcggcggtactccgacctttttcagcccg
gaaaacctcgcccgtcttgtcgagaatctcttcaggaccgtcaatcgcatggacaactac
atgttcagtttcgaaaccaatccccgttccacctccaaagagcaccttgaagcgctctac
cgtgtcggtttccggagaatgagtttcggcatccaggacttcgatccggttgtgcagcag
gagatcaatcgtccccagtccttcgaactggtcaaggagaaggttgaccttgcccgtcag
atcggctttacctctgtgaacttcgatcttgtgtacggtcttcccaagcagacgcttgcc
accataaccgacaccatcgacaaggtcatgcagctccggcccgaccgcctcgcgttctat
gcctacggtcacaaccctcacatgtacgaaggacagcgcaaattcaaggaagaggacctt
ccggtcggcgacgtcaaacaggagctttacgacaaggggcgtgccatgcttgagtccatc
ggctatcatgagataggcatggatcatttcgcgcttgagggcgattcgctctaccttgca
gcaaaagacggctccctgcaccggaacttcatgggctataccgaaaacacaacgcagatg
atgatcgccctcggcgcatcgtcgatcagcgatacctggtacgcctttgcgcagaacgaa
cgcggtgatcagaaatatatcgaagagatcaataaaggccgtttcccgattcttcgcggc
catctgcttaccgatgaagatcttgtgctcagacgccacatcctcaatctcatgtgccgt
caggagacgtcatgggaagatccgaaaatgtacaccgaagagctcgacatcgcgcgttac
cgccttgaggatatggagaacgacggtttggtggtgcttctggaaaacggcgtgcgggta
accgaaatcggcattccttttctccggaacatctgtatggctttcgatgcgcgcctctgg
cgttccgacagcctttcgaaagcgtacaacgtatccagggatatacagaaagagtatatc
gaaaaggcacgtcaggccaaagcccagcagcaggtcagttga
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