Chlorobium limicola: Clim_1965
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Entry
Clim_1965 CDS
T00766
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cli
Chlorobium limicola
Pathway
cli00260
Glycine, serine and threonine metabolism
cli00460
Cyanoamino acid metabolism
cli00630
Glyoxylate and dicarboxylate metabolism
cli00670
One carbon pool by folate
cli00680
Methane metabolism
cli01100
Metabolic pathways
cli01110
Biosynthesis of secondary metabolites
cli01120
Microbial metabolism in diverse environments
cli01200
Carbon metabolism
cli01230
Biosynthesis of amino acids
cli01240
Biosynthesis of cofactors
cli04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Clim_1965
09102 Energy metabolism
00680 Methane metabolism
Clim_1965
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Clim_1965
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Clim_1965
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Clim_1965
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Clim_1965
Enzymes [BR:
cli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Clim_1965
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF7648
Motif
Other DBs
NCBI-ProteinID:
ACD90997
UniProt:
B3EFN5
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Position
complement(2180109..2181434)
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AA seq
441 aa
AA seq
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MMDTDILRMQDKEVFEAIAGETLRQTETLELIASENFTSRAVMQACGSLMTNKYAEGYPG
KRYYGGCEFVDIAENLARDRAKKLFGCQYVNVQPHSGSSANMAVLFSVLKPGDRIMGLDL
SHGGHLTHGSPVNFSGQLFDAHSYGVDRETGCIDMNRVEELALEVRPKLIICGASAYSQG
FDFKAFREIADKVGALLMADIAHPAGLIAAGLLSDPMPHCHFVTTTTHKTLRGPRGGMIM
MGSDFENPLGITIKTKTGSRVKMMSEVMDAEVMPGIQGGPLMHIIAGKAVAFGEALQPAF
REYAVQVRKNAAAMAESFAGLGYNIVSGGTKNHLMLLDLRNKEVNGKVAENLLHEAGITV
NKNMVPFDDKSPFVTSGIRIGTAAMTTRGMTENDSRTVAGLIDQVISSANSAGVEEICRT
VRHDIRELCLAYPLEGYGVNP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatggataccgacatcctgaggatgcaggataaagaggttttcgaggcgatagccggc
gaaaccctgaggcagacagaaaccctcgaactcatcgcatccgagaacttcaccagcagg
gccgtcatgcaggcctgcggctcgctcatgaccaacaaatatgccgaaggttatcccgga
aagcgctattacggagggtgcgagtttgtcgatattgctgaaaatcttgcccgcgatcgt
gcaaaaaaacttttcggctgccagtatgtcaacgttcagccgcattccggttcgagcgcc
aacatggcggtgcttttttcggtgctcaagccgggcgaccgcattatgggcctcgatctc
tcgcatggaggccatcttacgcacggcagcccggtgaacttttcagggcagctttttgat
gcacactcctacggcgtcgaccgtgagaccggctgcatcgacatgaaccgggtcgaagaa
ctggcgcttgaggtccgtcctaaactcatcatctgcggtgcgagcgcctactctcagggg
tttgatttcaaggcattcagggagatcgccgacaaggtcggtgcccttctgatggccgat
atcgcccaccctgcaggtctgattgccgccgggctgctcagcgaccccatgccgcactgt
catttcgttaccacgactacccacaagacgctccgcggccccagagggggtatgatcatg
atgggcagcgactttgaaaatcctctcggcattaccatcaaaacgaaaaccggatcgagg
gtgaaaatgatgtcggaggtcatggatgccgaagtgatgcccggtattcagggtggtccg
ctcatgcacatcatagcgggaaaggccgttgccttcggcgaggcgctgcagccggcattc
agggagtatgccgtgcaggtcaggaaaaatgcagctgcaatggccgaaagttttgccggt
ctcggttataatattgtcagcggcggcaccaaaaaccatctcatgctgctcgatctgcgc
aacaaggaggttaacggcaaggtggcggaaaatctgctgcatgaggcaggcatcacggtc
aacaagaatatggtgccgtttgacgataaatcgcctttcgttaccagcggcatcaggatc
ggtactgcggccatgaccactcgcgggatgaccgaaaacgacagccggacggttgccggg
ctgatcgaccaggttatttcatcggcgaattccgccggagtagaagagatatgccgtaca
gtacggcatgatatcagggaactctgtttggcttatccgcttgaaggatacggcgtaaac
ccctga
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