Chlorobium limicola: Clim_2069
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Entry
Clim_2069 CDS
T00766
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cli
Chlorobium limicola
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cli01002
]
Clim_2069
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cli01011
]
Clim_2069
Peptidases and inhibitors [BR:
cli01002
]
Cysteine peptidases
Family C82
Clim_2069
Peptidoglycan biosynthesis and degradation proteins [BR:
cli01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Clim_2069
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACD91098
UniProt:
B3EG89
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All DBs
Position
complement(2280937..2282619)
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AA seq
560 aa
AA seq
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MRAFVFLLLLLVSARVVQGEPVSLQNQVIGKKTTARQHAPDSVLAAQLRCHFQAMDSNAA
GPERRAFNNQLARFYAARNYRPVWTERADIAELIEAIGESENDGLIPDDYHIKEIRTFFL
SPPRTPELQAKYDLLLSDALLSLAYHLRFGKVDPESLDPNWNLDGTARRTALEYRLQNAL
AAGRPKAALDELRPKHSGYAELKKGLARYRVIARAGGWQKVPEGDSFREGVRDSRVPLLR
KRLQQSGDLPGGVTDSSKVYTAAMANAVKRFQKRNGLSVDGVAGTATIGEINISAAERVD
QIRLNLERYRWFVNDLEPTYVLVNIAGFTLQYIENGRYRWGTRVIVGQPYRETPVFKADM
QYIVFNPQWVIPPTILAEDALPAIRNSRSYLDRKKLRVIDSRGRVVDPASVNWSGYSAAN
FPYRLQQTAGDHGALGRIKFMMPNKHVIYLHDTPTKNLFEKSERTFSSGCIRVENPLDLA
QLVLQDSVKWNKTSIDSTIGTGKTSTVNLPKRIPVFLLYLTAIAEGEEIQFRRDVYNRDD
RLRKALDSPVPQYRIESCGL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagagctttcgtttttcttctgcttttgcttgtttcggctcgagtcgttcagggcgag
ccggtttctcttcagaatcaggttatcggaaagaaaacgacggctcggcagcatgcgccc
gattccgttctcgctgcacagttgcgttgccattttcaggcgatggacagcaacgcggca
ggtccggaacggagggcattcaacaatcagctggcccgcttttatgccgcacggaactat
aggccggtctggacggaacgggcagacattgccgaactcatcgaagccatcggtgaaagt
gaaaacgatgggttgattcccgatgattatcacatcaaagagatccgcacttttttcctc
tctcctccgcgtactcctgaactgcaggcgaagtacgatctgctgctcagcgatgcattg
ctgagtcttgcatatcatcttcgtttcgggaaagtagatccggaaagccttgaccccaac
tggaatcttgacggcactgcgcgtcggacggcacttgaataccggttgcagaatgctctt
gccgcgggccgccccaaagcggcgctcgatgaacttcgaccgaagcattccggatacgcc
gaactgaaaaaaggtctggcccgctaccgggttatcgcacgggcaggtggttggcagaag
gttcccgagggggattctttcagggaaggagtcagagacagccgggttcctctccttcga
aaacggcttcagcagtccggagaccttccgggcggggttaccgacagctcgaaggtatac
actgctgccatggcaaatgccgtgaaacggtttcagaaacgcaacggcctgtcggttgac
ggcgtagccggaacggcgacaatcggtgaaatcaatatttcagcagctgagcgtgtcgat
cagatacgccttaatctggagcgttaccgctggttcgtcaacgatctcgagccaacctac
gtgctggtgaacattgccggcttcactctgcagtatatagagaacgggcgctatcgctgg
ggaacgcgggtgattgtgggacaaccctatcgagagaccccggttttcaaggcagatatg
cagtatatcgtcttcaatccgcaatgggttattccgccgaccattcttgccgaggacgct
ctcccggccattcgtaacagccgctcctatcttgacagaaagaaactcagggtaatcgat
tccaggggcagggtggtcgatccggcttcagtcaactggtcgggctattcggcagccaac
tttccctatcggcttcagcaaacagccggtgaccatggagcccttggcagaatcaagttc
atgatgcccaacaaacacgttatctatcttcacgatacgccgaccaaaaacctgtttgaa
aaaagcgagcgcaccttcagttccggttgtataagggttgaaaatccgctcgatcttgcg
cagcttgtgctgcaggattcggtaaaatggaacaaaaccagtatcgacagcactatcggt
acgggaaaaacaagcacggtcaatcttccgaaaaggataccggtttttcttctctatctg
acggcaatcgccgaaggtgaggagatacagttccgccgggatgtctataaccgagacgat
cgccttcggaaggcgctcgattcaccggtaccgcaataccggatcgaaagctgcggactc
tga
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