Chlorobium limicola: Clim_2175
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Entry
Clim_2175 CDS
T00766
Name
(GenBank) aminotransferase class V
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
cli
Chlorobium limicola
Pathway
cli00730
Thiamine metabolism
cli01100
Metabolic pathways
cli01240
Biosynthesis of cofactors
cli04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Clim_2175
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Clim_2175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cli03016
]
Clim_2175
03029 Mitochondrial biogenesis [BR:
cli03029
]
Clim_2175
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cli02048
]
Clim_2175
Enzymes [BR:
cli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Clim_2175
Transfer RNA biogenesis [BR:
cli03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Clim_2175
Prokaryotic type
Clim_2175
Mitochondrial biogenesis [BR:
cli03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Clim_2175
Prokaryotic defense system [BR:
cli02048
]
DNA phosphothiolation system
Sulfur modification proteins
Clim_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACD91199
UniProt:
B3EGT6
LinkDB
All DBs
Position
complement(2412896..2414092)
Genome browser
AA seq
398 aa
AA seq
DB search
MKVYFDNNATTPLHPEVKKELIEAMGMFGNPSSMHAWGREARANVEDARSRVAGFIGAHD
DEIVFVGSGSEANNTVLSLFVCASNQCIPGTRMRSSIITTKIEHPCVLETSECLAHRGAR
VKYLNVDRYGKVDLDQLAGMLGDDVGLVSVMMANNEIGTLQDIETISKMVHECGALMHTD
AVQAVGKIPVDVAMLGVDFLTLSAHKIYGPKGVGALYVKKGIPYCPFIRGGHQERGRRAG
TENTLGILGLGKAVEMRQLEMESEEKRLAGMKAVLKKGIEERIDDIYFNGHPTDSLSGTL
NVSFPGAEGEAILLYLDLEGIAVSTGSACASGSLDPSHVLLATGVDAERAHGSIRISLGR
ESTMQEVEYMLDILPKTIKRIRDMSTAYIKGGTHAASR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttattttgataataatgcaaccactcctctgcatcccgaagttaaaaaggag
ttgatcgaagcgatggggatgttcggtaacccttcgagtatgcatgcctggggccgcgag
gctcgggccaatgtcgaggatgcccggagtcgggtggccggttttattggagcgcatgac
gatgagattgtttttgtcggcagtggttccgaagccaataataccgtgctctctcttttt
gtctgcgcctcaaaccagtgtattcccggtaccaggatgcgcagttccattattacgacg
aaaattgaacacccctgtgtgcttgaaacctcggaatgtctcgctcaccggggggcaagg
gtaaagtatctcaatgttgaccgttacggaaaagtcgatctcgatcagcttgccggtatg
cttggagatgatgtcggtcttgtttcggttatgatggcgaataatgagatcggtacgctg
caggatattgaaaccatatcgaaaatggtgcatgagtgcggtgcgctgatgcacacggat
gctgttcaggcggtcggaaagattccggttgacgtcgccatgctcggggtggattttctt
acgctttcggctcataaaatatatggaccgaaaggggttggagctctctatgtgaaaaaa
ggcattccttactgtccgttcatccgcggaggtcatcaggagagaggtcgtcgggcggga
actgaaaatacgcttggcattcttggtctcggaaaggccgtcgaaatgcgacagctcgaa
atggagtctgaagaaaagcgactggccgggatgaaagcggttcttaaaaaaggcattgaa
gagcggatcgacgatatttatttcaacgggcacccgaccgactccctttcgggaaccctg
aacgtttcgtttcccggagctgagggagaggcgattctgctctatctcgatcttgaaggc
attgcggtttcaaccgggtcggcctgcgcctcaggatctctcgacccgtctcatgtactg
ctggcaacgggagtcgatgcagagcgagcgcacggatccatccgtatcagcctcgggcgg
gaaagcaccatgcaggaggtcgagtacatgctcgatatactgcctaaaacaattaaacgg
ataagagacatgtcaacggcatacattaaaggaggaacacatgctgcaagcaggtga
DBGET
integrated database retrieval system
