Chlorobium limicola: Clim_2518
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Entry
Clim_2518 CDS
T00766
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cli
Chlorobium limicola
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cli03009
]
Clim_2518
Enzymes [BR:
cli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Clim_2518
Ribosome biogenesis [BR:
cli03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Clim_2518
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
UPF0020
MTS
RrnaAD
Methyltransf_15
Cons_hypoth95
DOT1
MTD
Methyltransf_11
FtsJ
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ACD91536
UniProt:
B3EIM4
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All DBs
Position
complement(2757198..2758646)
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AA seq
482 aa
AA seq
DB search
MIRMEQTALKKGDVIELTVTDFADKDRCFGRLDCGISVMVTGMLAPGDRVKALIRKVKQR
YIDASAVEVTMSSPDRVEPVCSYFGVCGGCKLMHISYEAQLRYKRKKVIDDLVHIGGFTD
PPVHPVLPARHSCHYRNKVELSCSSIRYLMPEELSQEELSRSRDFGLGFHAPGNYEKVID
IDYCYLANEPMNSAVRLTREFALANRLAPYAVKAHAGFLRNLVLRTSEYTGRLMVNIVTS
WHDRELMARYADMLVAALPDQDLTVVNNVTTKKNTVATGEQEFVVYGEGALTERLGELDF
RVSANSFFQTNSSQAAVLYAEILKVAGIRPDDTVYDLYCGTGTITLYLARHCRMAAGLEV
VESSLSDAAKNADLNGITNAVFFQTDLKDFHAMLQKLENYDAPGVIVTDPPRAGMHPKAL
ETMLKLRARTIVYVSCNPSNLARDGKEISRYGYRLVSVQPVDMFPHTVHVESVACFERID
HY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtatggaacagactgccctgaaaaaaggtgacgttatagagttgacggttacc
gattttgccgacaaggatcgctgtttcggacgtcttgattgtggtatcagcgtaatggtc
accggaatgctggctccaggcgaccgggtgaaagcccttatcagaaaggtgaagcaacgc
tatatcgacgcttcagccgttgaagtgacgatgtcgtctcccgaccgggtagaaccggta
tgttcatatttcggggtttgcggagggtgtaagctcatgcatatctcatacgaggcgcag
ttgcgttacaagcggaaaaaggtcattgacgatcttgtacatatcggaggttttaccgat
cctcccgtacatcccgtgctccctgccaggcactcctgtcattaccgcaacaaggtcgag
ctttcctgttcgagtatccgttatcttatgccggaagagctttcgcaggaggagctttcc
cgttcgagggatttcggtctggggtttcatgctccgggaaactacgagaaggtgatcgac
atcgactactgctatctggccaacgagccgatgaacagcgcggtcaggctgacccgtgaa
tttgctctcgccaatcgccttgccccttatgctgtcaaagcgcatgcaggctttctgcgc
aatctggtactgcgcacaagcgaatataccgggaggctgatggtcaatatcgttacttca
tggcatgaccgcgaattgatggcccgttatgcagatatgcttgttgctgcgcttccggat
caggatctgacggttgtaaacaatgtcacgacaaaaaagaacacggttgctacaggtgag
caggagttcgtggtttacggggagggtgcgctgacggaacggcttggcgaactcgatttc
agggtatctgcgaattcgtttttccagacaaactcgtcacaggcagcagttctctacgct
gagatcctcaaagtggcgggaatcaggccggatgataccgtttatgatctttactgcggg
accggcaccataacgctctatcttgcaaggcattgtcggatggcggcagggttggaggtt
gtagagagttcactcagtgatgcggcaaagaacgccgatttgaatggcatcaccaatgct
gtgttttttcagacagatctgaaagattttcatgctatgcttcagaaacttgaaaattat
gatgctcctggtgttattgtgacggaccctccaagagcgggcatgcatccgaaagctctt
gaaaccatgctcaaactcagagcccgtacgatcgtctatgtgagctgcaatccttcgaat
cttgccagagacggcaaggagatctcccgttacggataccggttggtttcagtgcagccg
gtcgatatgtttcctcacacggtgcatgtagaaagcgttgcctgtttcgagaggatcgat
cattactga
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