Corynebacterium liangguodongii: C3E79_01645
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Entry
C3E79_01645 CDS
T07317
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
clia
Corynebacterium liangguodongii
Pathway
clia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3E79_01645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clia03021
]
C3E79_01645
03400 DNA repair and recombination proteins [BR:
clia03400
]
C3E79_01645
Enzymes [BR:
clia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3E79_01645
Transcription machinery [BR:
clia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3E79_01645
DNA repair and recombination proteins [BR:
clia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3E79_01645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AWB83348
UniProt:
A0A2S0WC61
LinkDB
All DBs
Position
343451..347449
Genome browser
AA seq
1332 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEAEMILEKKEVEADANSEIAERAQKLEED
LAELEAAGANASSRKKVQQAADKEMTHIRQAAEREVERLDEVWQTFVKLAPKQMVIDENL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRSIIAEGKGQKKIRALKRLKVVA
AFQRSGNNPDGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGTRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMLKGEGEIGGE
GAYAPADDNGPARGVYTSYREAIMAYDRGVLGLQAPIKVSIDHLRPTPEIEAEQFPDGWT
QGQAWMADTTLGRIMFNDLLPYNFPYQEGAMVRKGGGSGKVLLGDIIESMVERYPMITVS
QTLDKMKDAGFYWATRSGVTISMSDVLVLPNKVEVLEQYEREAEEIERKFWEKGALTEEN
RYDRLVELWQDATNRVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTHQGVKVPVARKVGEKWVRDELVETSVSGRVVASDAKDADGNVVLPAGADLGEENID
KLVAAGVEEVKVRSVLTCQTATGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASAAGTVSLEDEGNFWTLTIHPDD
GSDDVVYEKLSKRQGLAQVRRPMESNPNAMIERSLREGDRVEVGDRLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGNVIDSGDTEFLPGTLVDLA
EARQVNAQVVADGGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDK
LIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPTFGDSIYGDDGYGEFTGA
SVPLDEYGFDQM
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcattggcctggccaccgccgacgacatc
cgccgttggtcccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
ccggaaaaggacgggctgttctgcgagcgcatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatggggcacatcgagctcgccgccccg
gtgacccacatctggtacttcaagggcgtgccttcccgcctgggctacctgcttgacctg
gcgccgaaggacctcgagcggatcatctacttcgccgccaacatcattacctccgtcgac
gatgaggctcgccacaacgacctctcgacgcttgaggccgagatgatcctggagaagaag
gaagtcgaggccgacgcgaactcggagatcgctgagcgcgcgcagaagctcgaggaagac
ctcgccgagctcgaggccgcaggcgccaacgcctcttcccgtaagaaggtgcagcaggcc
gccgacaaggagatgacgcacatccgccaggccgcggagcgcgaggtcgagcgcctcgac
gaggtgtggcagacctttgtcaagctcgcgccgaagcagatggtgatcgatgagaacctc
tacgaggagctcgtcgaccgctacgaggactacttcaccggcggcatgggcgccgaggcc
atccagacgctcatccgcaatttcgatctcgacgccgaggccgaggagctgcgctccatc
atcgctgagggcaagggtcagaagaagatccgcgcgctcaagcgcctcaaggtcgttgcc
gcgttccagcgctccggcaacaacccggacggcatgatcctggacgcgattccggtcatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgtttcgccacctcggacttg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcatgattgacctc
ggcgcgcccgagatcatcgtgaacaacgaaaagcgcatgctgcaggagtccgtcgacgcg
ctgttcgacaacgggcgtcgcggccgcccggtcaccggcccgggcacccgcccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgcgtggactactcggggcgctccgttattatcgtcggcccccagctcaagctccacgag
tgcggcctgcccaagctcatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaacgactacgcgcaaaacatcaagtccgccaagcgcatggtcgagcgccagcgc
cccgaggtgtgggacgtgctcgaggaggccatctccgagcacccggtgctgctcaaccgc
gcaccgacgctgcaccgcctgggcatccaggcgttcgagccgaagctggtcgagggcaag
gccatccagctgcaccccctggcctgtgaggctttcaacgccgacttcgacggcgaccag
atggctgtccacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctcatgctc
gcttcgaacaatattttgtccccggcctccggcaagcctctggccatgccgcgcctggac
atggttaccggcctgtacttcctcaccatgctcaagggcgagggagaaatcggcggcgag
ggcgcttacgccccggccgacgataacggccccgcgcgcggtgtctacacctcctaccgc
gaggcgatcatggcctacgaccgcggggtgctcggcctgcaggcgccgatcaaggtgagc
atcgaccacctgcgcccgaccccggagatcgaggcggagcagttcccggacggttggacg
cagggccaggcctggatggccgatacgaccctgggccgcatcatgttcaacgaccttctg
ccgtacaacttcccgtaccaggaaggcgcgatggtgcgcaagggcggtggctccggaaag
gtgctgctcggcgacatcatcgagtccatggtggagcgctacccgatgatcacggtctcg
cagaccctggacaagatgaaggacgccgggttctactgggcgacccgttccggcgtgacc
atctccatgtccgacgttctcgtcctgccgaacaaggtcgaggtgctcgagcagtacgag
cgcgaggcggaggagatcgagcgcaagttctgggagaagggtgcgctgacggaggagaac
cgttacgaccgcctcgttgagctctggcaggacgccaccaacagggtcggccaggctgtc
gaagacctctacccggacgacaacccgattccgatgatcgtgaagtcgggcgcggccggt
aacatgcgccagatctggacgctggccggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgagggcctgtccgtgatggagtac
ttcaacaactcgcacggctcccgcaagggcctggccgatacggcgctgcgtaccgcggac
tcgggttatctgacgcgtcgtcttgtcgacgtcgcccaggacgtcatcgtccgcgaggac
gactgcggcacgcaccagggcgtgaaggtccccgtcgcccgcaaggtgggcgagaagtgg
gtccgcgacgagctggtggagacctccgtctccggccgcgtcgtcgcctcggacgcgaag
gacgccgacggcaacgtcgtgctccccgcgggcgctgacctgggtgaggagaacatcgac
aagctcgttgccgccggcgtggaagaggtcaaggtccgctccgtgctcacctgccagacg
gctaccggcgtgtgcgcgaagtgctacggcaagtcgatggccaccggcaagctcgtcgac
atcggcgaggcggtgggcatcgtggccgctcagtcgatcggtgagcccggcacccagctg
accatgcgtaccttccaccagggcggtgtcggcggcgacatcaccggcggcctgccccgc
gtgcaggagctcttcgaggcccgcgtgccgaagaaccgcgccccgatcgcctcggcggca
ggtacggtctcgctggaggacgagggcaacttctggacgctgaccatccacccggacgac
ggctccgacgacgtggtctacgagaagctctccaagcgccagggcctggcccaggtgcgc
cgcccgatggagtccaacccgaacgcgatgatcgagcgctccctgcgcgagggcgaccgc
gtcgaggtcggcgatcggctcctgcgcggcgcggctgacccgcacgacgtgctcgaggtg
ctcggtcggcgaggcgtcgagaagcacctcatcgacgaggtgcaggcggtctaccgcacc
cagggcgtgtccatccacgacaagcacatcgagatcatcatccgccagatgctgcgccgc
ggtaacgtcatcgactccggcgatacggagttcctgccgggcaccctggtcgacctcgcc
gaggcccgccaggtcaacgcgcaggtcgtcgccgacggcggccagccggcggagatgcgc
tcggagatcatgggcattaccaaggcctcgctggcgacggagtcgtggctgtccgcggcc
tcgttccaggagaccacgcgcgtgcttaccgacgccgccattaacaagcgctccgacaag
ctcatcggcctgaaggagaacgtgatcatcggtaagctcatcccggccggtacgggtatc
tcgcgctaccgcaacatccaggtcaagccgaccgaggcggcgcgcagcgcggcgtactcg
atcccgaccttcggtgattcgatttacggcgacgacggctacggcgagttcaccggtgcc
tcggtgccgctcgatgagtacgggttcgaccagatgtag
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integrated database retrieval system
