Corynebacterium liangguodongii: C3E79_02875
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Entry
C3E79_02875 CDS
T07317
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clia
Corynebacterium liangguodongii
Pathway
clia03420
Nucleotide excision repair
clia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3E79_02875
03430 Mismatch repair
C3E79_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clia03400
]
C3E79_02875
Enzymes [BR:
clia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E79_02875
DNA repair and recombination proteins [BR:
clia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3E79_02875
MMR (mismatch excision repair)
Other MMR factors
C3E79_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWB83563
UniProt:
A0A2S0WCR9
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All DBs
Position
598873..602178
Genome browser
AA seq
1101 aa
AA seq
DB search
MSPAVLSKYLGQKFPPTEQQAEIIGAEPGPLLVVAGAGAGKTETMAARVVWLVANGYARP
EEVLGLTFTRKAAQELGKRIRDRLSALASNADLVRRLDPSGQLARSLEIIAPTVSTYDAY
AGDLVREYGLLVPVEPDARMITDAELHAIAHEVVQDYAGTLLVPGGANPTPASVVTDLLD
LVTNMGNDLAEPDEVAEHARTFLAETEALDGGKDPAKFTNEMTRWRATQERRRAYLPLVE
KLASELAARGVVTFNEQMSVAARLASHHPAVGASQRSRFRVVMLDEYQDTSHAQRVLLRS
LFGEGSGSSEDGRNPLTVTAVGDPMQAIYGWRGATVENLAAFVEDFPAPDGGPAPKMQLT
TSWRNPPEVLALANEVSDALLGTGAKRPVAPLEPRPGAAPGEVLLGYFERDDEELDFLAD
ELARQYNQAQEDGEPFSAAVLVRANKTSPEVAEALAARGIPYEIVGLAGLLDVPEVADTV
AIATMLVRPDDSAAALRVLAGPAVGLGLDDLDALAARAANLRGARPEAEMLEDPLEHYRA
QLRQLVEEAADITAGGDAPAGLTDAVADHGEEERYSQEGLARINALSSKLRRLRTQSLGK
RLPDLFADIISVFGIRTEVLSRPSATGAAHLDRLLDVVATYPGTSLDSLLDYFQLAREHE
GGLTPGNVVVASDRVQILTAHKAKGLEWDTVAVARADASTYKAQASTFLTQIGRVPDEDF
DAFDDAEDRKQFAKAAKNYIAADREKMAEEAARLFYVAVTRTERKLIITASRTVPGRQSA
AEPYEHFAAIRGLVPDHAVVAWAGGEGRGEGREESSAEETAPAEPVSFDREREGTWPHLR
VDPADAAAADLVSAAIEDLPALTEGELYSLWERDTTALIEEHLAAQAPEVPVMLPGELTA
SDMVALKADPEQFARRARRPVPFKPNAYAKRGTAFHAWLEEFYHARPLLTEDELPGGEEP
DVDKRTLELLKSNFEKSHWAAKTPAYVEQPFELALGSAVVRGRMDAVFEQGGSWVVVDWK
TGTKPAPAQMESAKLQLAVYAEAWRRIAADGRPVRAMFFYVRTGEDFEPGELPGSAELER
LLRQSAGHGLEFQADSGAERA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggccgtgctctcgaaataccttggtcaaaaattcccgccgactgagcagcag
gcggagatcatcggcgccgagcctggccccctgctcgtcgtggcgggcgcgggcgcgggc
aagacggagaccatggcggcgcgcgtggtctggctcgtggccaacgggtacgcccgcccc
gaggaagtcctcgggttgacgtttacgcgcaaggcggcccaagagctgggtaaacgcatc
cgcgaccggctgagcgcgctcgcctccaacgctgacctcgtgcgccggctcgacccctcg
gggcagctggcgagatccctcgagatcatcgcgccgaccgtgtccacgtacgacgcctac
gccggcgacctcgtgcgcgaatacggcttgctcgtcccggtcgagccagatgcgcgcatg
atcaccgacgcggagctgcacgccatcgcacacgaggtcgtgcaggactacgccgggacg
ctcctcgtgcccggcggggcgaacccgacccccgcgtctgtcgtcaccgacctcctcgac
ctggtgaccaacatgggtaatgacctcgccgaacccgacgaggttgccgagcatgcgcgc
acgttcctcgcggagacggaggcgctggacgggggtaaggatccggcgaagttcaccaac
gagatgacgagatggcgcgctacccaggagcgccgccgcgcctacctgccgctggtggaa
aagcttgcctccgagctggccgcacggggcgtggtcaccttcaacgagcagatgtccgtc
gccgcgcggctcgcttcccaccacccggcggtgggagcatcccagcgcagccgcttccga
gtggtcatgctcgacgaataccaagacacctcccacgcgcagcgcgtgttgttgcgcagc
ctcttcggcgagggctcaggcagcagcgaagacggccggaacccgctcacggtcaccgcg
gtgggcgaccccatgcaggccatctacggctggcgcggggctaccgtggaaaacctcgcc
gccttcgtcgaggatttccctgccccagacggcgggcccgcgccaaagatgcagctcacg
acctcgtggcgcaatccgccggaggtgctcgcactcgcaaacgaggtctcggacgcgctg
ctgggcaccggcgcgaaacgccctgtcgcgccgctcgagccgcgcccgggcgcggccccc
ggcgaggtgctgctcggctacttcgagcgagacgacgaagaactcgacttcctcgccgac
gagctcgcccggcaatacaaccaggcccaggaagacggggagccgttctccgcggccgtg
ctcgtgcgcgccaacaagacctctcctgaggtggcagaggcgctggccgcgcgcgggatc
ccctacgaaattgtcgggctggccggcctcctcgacgtccccgaggtcgccgataccgtg
gcaatcgccacaatgctcgtgcgcccggacgactccgctgcggcgctgcgtgtcttggca
gggccggcggtggggctaggcctcgacgacctcgatgcgctcgccgcccgggccgccaat
ctgcgtggcgcgcgcccggaagccgagatgctcgaggacccgctcgagcactaccgggcg
cagctgcgccagctcgtcgaggaggccgccgacatcactgcggggggcgacgcgccggcc
ggcctcaccgatgctgtggcggaccacggcgaggaggagcgctacagccaggaaggcctc
gcccgcatcaacgcactctcctccaagctccgcaggctgcgcactcagtcgctgggcaag
cggctgcccgacttgttcgccgacatcatctcggtcttcggcatccgcaccgaggtgctc
tcgcgcccctccgccaccggggcggcccacctcgaccgcctcttggacgtggtcgccacc
tacccgggcaccagccttgactccctcctggactacttccagctcgcgcgcgagcacgag
ggcggcctcaccccaggaaacgtggtcgtggcctccgacagggtacagatcctcaccgcc
cacaaggcgaagggcctcgaatgggataccgtcgccgtcgcgcgcgccgacgcctcgacg
tacaaggcccaggcctcgacgttcctcacccagatcgggcgcgtgccggacgaagacttc
gacgccttcgacgacgctgaggaccgcaagcagttcgcgaaggcggcgaagaactacatc
gccgcagaccgcgagaagatggcggaggaggccgcccgcctgttctacgtcgcggttacc
cgcaccgagcgcaagctcatcatcaccgcctcgcgcaccgtgcccggccgccagagcgcc
gcggagccctacgagcacttcgcggcgatccgcgggctcgtccctgatcacgccgtggtg
gcctgggccgggggagaaggcaggggagaaggcagggaagaaagctctgccgaagagacg
gccccggccgagcctgtgagcttcgaccgcgagcgggaggggacctggccgcacctgcgc
gtcgatcccgcggacgcggcggcggccgacctcgtctccgcggccatcgaagacctcccc
gcgctgaccgagggggagctctactccctctgggagcgcgacaccacggcgctcatcgaa
gaacacctcgccgcgcaggccccggaggtgccggtcatgctgcccggcgagctcacggcc
tccgacatggtggcgctgaaggccgatccggaacagtttgcccgccgcgcgaggcgcccc
gtgccgtttaaacccaacgcgtacgccaagcgcggcaccgcgttccacgcctggctggaa
gagttctaccacgcccgcccgctgctgacggaagatgagcttcccgggggcgaggaaccg
gacgtggacaagcgcacgctcgagctgctcaaatccaacttcgagaaaagccattgggcc
gcgaagacgcccgcgtacgtcgagcagcccttcgagctcgcgctcggctccgccgtggtg
cggggcaggatggacgcggtcttcgagcaggggggcagctgggtggtcgtggactggaag
acgggcaccaagccggccccggcccagatggagagcgcgaagctccagctcgccgtctac
gccgaggcgtggcggcgcatcgcggcggacggcaggccggtgcgggcgatgtttttctac
gtgcgcaccggcgaagacttcgagcctggcgagctgcccggatccgccgagctcgagcgg
ttgcttcggcaatcggccgggcacgggctagagttccaagcagactccggcgcagaaagg
gcatga
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