KEGG   Corynebacterium liangguodongii: C3E79_05135
Entry
C3E79_05135       CDS       T07317                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
clia  Corynebacterium liangguodongii
Pathway
clia03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C3E79_05135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clia03400]
    C3E79_05135
DNA repair and recombination proteins [BR:clia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C3E79_05135
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C3E79_05135
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 RsgA_GTPase AAA_16 AAA_21 AAA_25 APS_kinase AAA_33 AAA_22 NACHT AAA_18 DnaJ_CXXCXGXG nSTAND3 NB-ARC AAA_14 cobW Viral_helicase1 ATPase MMR_HSR1 NTPase_1 SLFN-g3_helicase MeaB Septin ScfRs DUF87
Other DBs
NCBI-ProteinID: AWB83938
UniProt: A0A2S0WDT4
LinkDB
Position
1074193..1077048
AA seq 951 aa
MADRLTVRGAREHNLKGVDLDLPRDTMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDYIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLYARAGTPH
CPVCDAEINRQTPQQIVDQVFDHREGERFQVLAPVVRKRKGEFVDLFADLAAQGFARVTV
DGQTYQLTDPPKLEKQIKHTIDVVVDRLQVKESQKQRLTDSVETALGLADGLVAFEFVGR
EDDDPERYRIFSEKMACPNGHALNVEEYEPRAFSFNSPFGACPACDGLGTRKEVDIDLIV
PDPDAPAVDAFQPWNSSPNKGYFTKLIEALAAEEGFDAHAPFSSLTKTQQKHLTHGSKTK
VGVRYKNRYGRSRGFTAEFEGVIGYLERKLEQAESEHQKERLLAYTREIPCPTCKGARLK
PEILAVRLASKTHGELSIAGLAELSIEEASEYLDNLVLGRREEMIAGAVLREIQARLRFL
LDVGLSYLTLSRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNLRLIRT
LKKLRDLGNTLIVVEHDEDTIKEADWLVDVGPQAGEYGGEIVYQGEPKGIVSAEGSITGD
YLSGRKAIEVPSARRPVDFDRALTVVGARENNLDNVEVSIPLGVLVAVTGVSGSGKSTLV
NQILAKTLQNQLNGSRQVPGRVKRVEGLEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RNLFAETQEAKVRGYKAGRFSFNVKGGRCEACHGDGTIKIEMNFLPDVYVPCEVCEGARY
NRETLEVRYKGKNIAEVLNMPISEAAEFFEPIASIHRYLNTLVDVGLGYVRLGQAATTLS
GGEAQRVKLAAELQKRSNGRTIYILDEPTTGLHFEDIRKLMVVLNGLVDKGNTVLVIEHN
LDVIKSADWIIDMGPEGGSGGGTVVAEGTPEDVARVDASFTGQFLAPILGH
NT seq 2856 nt   +upstreamnt  +downstreamnt
gtggctgaccgcttgaccgtgcgcggggcgcgcgaacacaacctcaaaggggtagacctc
gacctgccgcgcgacaccatgatcgtgtttaccgggctttccggttcgggtaagtcctcg
ctggcctttgacacgatcttcgccgaggggcagaggcgctacgtcgagtcgctctcgtcg
tatgcgcgcatgttcctcgggcagatggataagcccgacgtcgactacatcgacggtctc
tccccagcggtgtcgatcgaccagaagtcgaccaaccgcaacccgcgctccaccgtggga
accatcacggagatctacgactacctccgcctgctctacgcccgggccggtacgccccac
tgcccggtgtgcgacgccgagatcaaccggcaaaccccgcaacagatcgtcgaccaggtc
ttcgaccacagggagggggagcggttccaggtcctcgcccccgtggtacgcaagcgcaag
ggcgagttcgtggacctgttcgcggaccttgccgcgcaggggttcgcccgcgtcaccgtc
gatgggcagacctatcagctcaccgacccgccgaagctggaaaagcagatcaagcacacg
attgacgtcgtggtagatcgcctccaggtcaaggagagccagaagcagcgcctcaccgat
tccgtggagacggccctcggtctcgcagacggccttgtcgccttcgagttcgtcgggcgc
gaggacgacgacccggagcgctaccgcatcttctccgaaaagatggcctgccccaacggg
cacgccctcaacgtcgaggagtacgagccgcgcgcgttttcgttcaactcgcccttcggc
gcgtgcccggcctgcgacgggctgggcacgcgcaaagaggtcgatatcgacctcatcgtg
ccggacccggatgccccggccgtcgacgcgttccagccttggaactcctcgccgaacaag
ggctatttcaccaaactcatcgaggccctggcggcagaggagggcttcgatgcccacgcg
ccgttttcctcgctgacaaaaacgcagcaaaagcacctcacccacgggtcgaaaaccaag
gtgggagtgcgctacaagaaccgctatgggcgctcgcggggctttaccgccgagttcgag
ggcgtcatcggctacctcgaacgcaagctcgagcaggcggagtccgagcaccagaaggaa
cggctgctcgcctacacccgcgagatcccgtgcccgacatgcaagggagcccgcctcaag
ccggagatcctcgctgtccgcctcgcctcgaagacccacggcgagctctcgatcgcgggg
ttggccgagctctctatcgaggaggcctcggaatacctcgacaacctcgtgcttggcagg
cgcgaagagatgatcgccggcgcggtgttgcgcgagatccaggcccggctgcgctttctt
ctcgacgtcgggctgagctacctcacgctctcgcgctccgccggaacgctctccggcggc
gaggcccagcgcatccgccttgccacgcagatcggatccgggctcgccggggtcctctac
gtcctcgacgagccgtcgatcgggctgcaccagcgcgataacctccgcctcatccggacg
ctgaagaagctgcgggatctcggcaacaccctcatcgtggtcgaacacgacgaagacacc
attaaggaagccgactggcttgtcgacgtcggcccgcaggccggggagtacggcggcgag
atcgtctaccagggcgagccgaagggcatcgtgtcggccgagggatcgatcacgggggac
tacctctcgggccgcaaggccattgaggtgccgagcgcgcgccgccccgtcgacttcgac
cgggccctcaccgtcgtcggcgcgcgggagaacaacctcgacaacgtcgaggtgtccatc
cccctcggcgtgctcgtcgcggtcacgggcgtctccggctcgggcaagtccacgctggtc
aaccagatcctggctaagacgttgcaaaaccagctcaacggctcgcggcaggtgccgggc
cgggtgaaaagggtcgagggcctggagcacttggacaagctcgtgcaggtagaccagagc
ccgattgggcgcacgccgcgttccaaccccgcgacgtataccggcgtgttcgacaaaatc
cgcaacctcttcgccgagacccaggaggcgaaggtgcgcgggtataaggccggccggttc
tcctttaacgtcaagggagggcgctgcgaagcctgccacggcgacggcacgatcaagatc
gagatgaacttcctgcccgatgtctacgtcccctgcgaggtctgcgagggagcgcgctac
aaccgggagacgctggaggtgcgctacaagggcaagaacatcgccgaggtgctcaacatg
ccgatctcggaggctgcggagttcttcgagccgatcgcctcgatccaccgttacctcaac
acgctcgttgatgtcgggctgggatacgtgcgcctcgggcaggccgccacgacgctctcc
ggcggcgaggcgcaacgcgtcaagctcgcagcggagctgcagaagcgttcgaacggccgc
acgatctacatcctcgacgagccgacgaccggcctacacttcgaggacatccgcaagctc
atggtcgtgctcaatggcttggtggacaagggaaacacggtcctcgtcatcgagcacaac
ctcgacgtgatcaagtctgcggactggatcatcgatatgggcccggagggcgggtcgggc
ggcggaaccgtcgtcgccgagggcacgccggaggacgtcgctcgtgtcgatgcctcattt
accggccagttcctcgcccccatactggggcactag

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