Corynebacterium liangguodongii: C3E79_05135
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Entry
C3E79_05135 CDS
T07317
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
clia
Corynebacterium liangguodongii
Pathway
clia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3E79_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clia03400
]
C3E79_05135
DNA repair and recombination proteins [BR:
clia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3E79_05135
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3E79_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_16
AAA_21
AAA_25
APS_kinase
AAA_33
AAA_22
NACHT
AAA_18
DnaJ_CXXCXGXG
nSTAND3
NB-ARC
AAA_14
cobW
Viral_helicase1
ATPase
MMR_HSR1
NTPase_1
SLFN-g3_helicase
MeaB
Septin
ScfRs
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWB83938
UniProt:
A0A2S0WDT4
LinkDB
All DBs
Position
1074193..1077048
Genome browser
AA seq
951 aa
AA seq
DB search
MADRLTVRGAREHNLKGVDLDLPRDTMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDYIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLYARAGTPH
CPVCDAEINRQTPQQIVDQVFDHREGERFQVLAPVVRKRKGEFVDLFADLAAQGFARVTV
DGQTYQLTDPPKLEKQIKHTIDVVVDRLQVKESQKQRLTDSVETALGLADGLVAFEFVGR
EDDDPERYRIFSEKMACPNGHALNVEEYEPRAFSFNSPFGACPACDGLGTRKEVDIDLIV
PDPDAPAVDAFQPWNSSPNKGYFTKLIEALAAEEGFDAHAPFSSLTKTQQKHLTHGSKTK
VGVRYKNRYGRSRGFTAEFEGVIGYLERKLEQAESEHQKERLLAYTREIPCPTCKGARLK
PEILAVRLASKTHGELSIAGLAELSIEEASEYLDNLVLGRREEMIAGAVLREIQARLRFL
LDVGLSYLTLSRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNLRLIRT
LKKLRDLGNTLIVVEHDEDTIKEADWLVDVGPQAGEYGGEIVYQGEPKGIVSAEGSITGD
YLSGRKAIEVPSARRPVDFDRALTVVGARENNLDNVEVSIPLGVLVAVTGVSGSGKSTLV
NQILAKTLQNQLNGSRQVPGRVKRVEGLEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RNLFAETQEAKVRGYKAGRFSFNVKGGRCEACHGDGTIKIEMNFLPDVYVPCEVCEGARY
NRETLEVRYKGKNIAEVLNMPISEAAEFFEPIASIHRYLNTLVDVGLGYVRLGQAATTLS
GGEAQRVKLAAELQKRSNGRTIYILDEPTTGLHFEDIRKLMVVLNGLVDKGNTVLVIEHN
LDVIKSADWIIDMGPEGGSGGGTVVAEGTPEDVARVDASFTGQFLAPILGH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgcttgaccgtgcgcggggcgcgcgaacacaacctcaaaggggtagacctc
gacctgccgcgcgacaccatgatcgtgtttaccgggctttccggttcgggtaagtcctcg
ctggcctttgacacgatcttcgccgaggggcagaggcgctacgtcgagtcgctctcgtcg
tatgcgcgcatgttcctcgggcagatggataagcccgacgtcgactacatcgacggtctc
tccccagcggtgtcgatcgaccagaagtcgaccaaccgcaacccgcgctccaccgtggga
accatcacggagatctacgactacctccgcctgctctacgcccgggccggtacgccccac
tgcccggtgtgcgacgccgagatcaaccggcaaaccccgcaacagatcgtcgaccaggtc
ttcgaccacagggagggggagcggttccaggtcctcgcccccgtggtacgcaagcgcaag
ggcgagttcgtggacctgttcgcggaccttgccgcgcaggggttcgcccgcgtcaccgtc
gatgggcagacctatcagctcaccgacccgccgaagctggaaaagcagatcaagcacacg
attgacgtcgtggtagatcgcctccaggtcaaggagagccagaagcagcgcctcaccgat
tccgtggagacggccctcggtctcgcagacggccttgtcgccttcgagttcgtcgggcgc
gaggacgacgacccggagcgctaccgcatcttctccgaaaagatggcctgccccaacggg
cacgccctcaacgtcgaggagtacgagccgcgcgcgttttcgttcaactcgcccttcggc
gcgtgcccggcctgcgacgggctgggcacgcgcaaagaggtcgatatcgacctcatcgtg
ccggacccggatgccccggccgtcgacgcgttccagccttggaactcctcgccgaacaag
ggctatttcaccaaactcatcgaggccctggcggcagaggagggcttcgatgcccacgcg
ccgttttcctcgctgacaaaaacgcagcaaaagcacctcacccacgggtcgaaaaccaag
gtgggagtgcgctacaagaaccgctatgggcgctcgcggggctttaccgccgagttcgag
ggcgtcatcggctacctcgaacgcaagctcgagcaggcggagtccgagcaccagaaggaa
cggctgctcgcctacacccgcgagatcccgtgcccgacatgcaagggagcccgcctcaag
ccggagatcctcgctgtccgcctcgcctcgaagacccacggcgagctctcgatcgcgggg
ttggccgagctctctatcgaggaggcctcggaatacctcgacaacctcgtgcttggcagg
cgcgaagagatgatcgccggcgcggtgttgcgcgagatccaggcccggctgcgctttctt
ctcgacgtcgggctgagctacctcacgctctcgcgctccgccggaacgctctccggcggc
gaggcccagcgcatccgccttgccacgcagatcggatccgggctcgccggggtcctctac
gtcctcgacgagccgtcgatcgggctgcaccagcgcgataacctccgcctcatccggacg
ctgaagaagctgcgggatctcggcaacaccctcatcgtggtcgaacacgacgaagacacc
attaaggaagccgactggcttgtcgacgtcggcccgcaggccggggagtacggcggcgag
atcgtctaccagggcgagccgaagggcatcgtgtcggccgagggatcgatcacgggggac
tacctctcgggccgcaaggccattgaggtgccgagcgcgcgccgccccgtcgacttcgac
cgggccctcaccgtcgtcggcgcgcgggagaacaacctcgacaacgtcgaggtgtccatc
cccctcggcgtgctcgtcgcggtcacgggcgtctccggctcgggcaagtccacgctggtc
aaccagatcctggctaagacgttgcaaaaccagctcaacggctcgcggcaggtgccgggc
cgggtgaaaagggtcgagggcctggagcacttggacaagctcgtgcaggtagaccagagc
ccgattgggcgcacgccgcgttccaaccccgcgacgtataccggcgtgttcgacaaaatc
cgcaacctcttcgccgagacccaggaggcgaaggtgcgcgggtataaggccggccggttc
tcctttaacgtcaagggagggcgctgcgaagcctgccacggcgacggcacgatcaagatc
gagatgaacttcctgcccgatgtctacgtcccctgcgaggtctgcgagggagcgcgctac
aaccgggagacgctggaggtgcgctacaagggcaagaacatcgccgaggtgctcaacatg
ccgatctcggaggctgcggagttcttcgagccgatcgcctcgatccaccgttacctcaac
acgctcgttgatgtcgggctgggatacgtgcgcctcgggcaggccgccacgacgctctcc
ggcggcgaggcgcaacgcgtcaagctcgcagcggagctgcagaagcgttcgaacggccgc
acgatctacatcctcgacgagccgacgaccggcctacacttcgaggacatccgcaagctc
atggtcgtgctcaatggcttggtggacaagggaaacacggtcctcgtcatcgagcacaac
ctcgacgtgatcaagtctgcggactggatcatcgatatgggcccggagggcgggtcgggc
ggcggaaccgtcgtcgccgagggcacgccggaggacgtcgctcgtgtcgatgcctcattt
accggccagttcctcgcccccatactggggcactag
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