Corynebacterium liangguodongii: C3E79_06720
Help
Entry
C3E79_06720 CDS
T07317
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
clia
Corynebacterium liangguodongii
Pathway
clia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3E79_06720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clia03019
]
C3E79_06720
Messenger RNA biogenesis [BR:
clia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3E79_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AWB84208
UniProt:
A0A2S0WEK7
LinkDB
All DBs
Position
complement(1395603..1397672)
Genome browser
AA seq
689 aa
AA seq
DB search
MNEPRNRARKVTRKAGPPEPADQQPVFQAPEQASGSESGSRKGGGESADAGRGDGADGRN
NNGNNGNNNNGGGRGRRRGRGRGGSNGGANNNGGNRRNPMKGMQGADLTKRLPAPPQAPR
NGLRIYALGGISEIGRNMTVFEYNGRLLVVDCGVLFPNSGEPGVDLVLPDFGPIENKLDK
IEALVVTHGHEDHIGAIPWLLKLRPDIPIYSSRFTNALIAAKTKEHRQRPKLHEVNKDSE
LTLGPFRVRFWHVGHSIPECLGVSIKTGAGHVVMTGDIKLDQTPYDGKPTDLPALSRFGD
EGIDLFMCDSTNATIPGISSSEKGIEDNLTRLVQGAKQRVIIASFASNVARVQMAVNAAV
ANGRKVAFNGRSMIRNMEIAEKMSLLRAPKGTIIPIEEAAKMAPHKVVLITTGTQGEPMA
ALSRMSRREHRQITVRDGDLIILSSSLIPGNEEAVFAVINNLAQIGATVITNSDAHVHAS
GHGYAGELLFLYNAARPRGAMPVHGEWRHLRANKELAISTGVKPENTALAQNGVVVDMID
GKISVVGQYQVGQLYVDGETMGDVDLDVLADRTSLASGGVVSITCVINDRTGRLLETPRV
STTGFSDDDRDFNKKVAEGVENVMNDLAAQGENDPYRMVQQLRRHVSKAIEQKYKREPVI
LPTVVPMAADNGDGAPIEDDEVFSSRESL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccccgcaaccgcgcccgtaaggtcacccgcaaagcgggtcccccggaaccg
gctgatcagcagcccgtctttcaggcccccgagcaggcgtccggatcagagtccggctcc
cgcaagggcggcggagagtcggccgatgctgggcgcggcgatggcgccgatggtcgcaac
aacaacggcaacaacggcaacaacaataatggcggcggtcgcggacggcgccgcggccgg
ggccgcggcggcagcaacggtggcgcgaacaacaacggcggcaaccgtcgcaacccgatg
aaggggatgcagggcgcggatttgaccaagcgcctcccggccccgccgcaggctccgcgc
aacgggctgcgtatctacgcgctcggcgggatctccgagatcggccgcaacatgaccgtt
tttgagtacaacggccgcctcctcgtcgtcgactgcggcgtgctgttcccgaactctggc
gaaccgggcgtcgatctcgtgctgccggatttcgggccgatcgagaacaaactcgacaag
atcgaggcgctcgtggtcacgcacggccacgaggaccacattggagcgatcccgtggctg
ctgaagctgcgcccggacatcccgatctactcgtcgcggtttaccaacgcgctcatcgcg
gcgaagacgaaggagcaccgccagcgcccgaagctccacgaagtgaacaaggactccgag
ctcaccctcggcccgttccgcgtgcgcttctggcacgtcggtcactccatcccggagtgc
ctcggcgtgtccatcaagacgggcgcggggcacgtggtgatgacgggcgatatcaagctc
gaccagacgccttacgacggcaagccgaccgaccttcccgcgctctcgcgcttcggcgac
gaaggcatcgatctgttcatgtgcgattccaccaacgcgacgatcccggggatttcctcg
tccgagaagggcattgaggacaacctcacccgcctggtccagggcgcgaagcagcgcgtg
atcattgcttcgttcgcctccaacgtcgcccgcgtgcagatggcggtcaacgcggcggtg
gcgaacgggcgcaaggtggccttcaacggacgctcgatgatccgcaacatggaaatcgcg
gagaagatgagcctgctgcgcgccccgaagggcaccatcatcccgatcgaggaggccgct
aagatggccccccacaaggtcgtgctcatcaccaccggcacccagggcgagccgatggcc
gcgctctcgcgcatgtcgcggcgcgagcaccgccagattacggtgcgcgacggtgacttg
atcatcttgtcctcgtcgctcatcccgggcaacgaggaggcggtcttcgccgtgatcaac
aacctcgcgcagatcggtgcgacggtgattacgaactccgacgcccacgtccacgcctcg
ggccacggctacgcgggcgagctgctcttcctctacaacgcggcgcgcccgcggggtgcg
atgccggtgcacggtgagtggcgccacctgcgtgcgaacaaggagctggcgatctcgacg
ggcgtgaagccggagaacaccgccctagcgcaaaacggcgtcgtggtggacatgatcgac
ggcaagatcagcgttgtcggccaataccaggtcggccagctctacgtggacggagagacg
atgggcgacgtggacctggatgtcttggcggatcgcaccagcctcgcctccggcggtgtc
gtctccatcacctgcgtgatcaacgatcgcacgggacggctcctcgagaccccgcgcgtg
tccacgacgggcttctcggacgacgaccgcgacttcaacaagaaggttgccgagggcgtg
gaaaacgtcatgaacgacctcgccgcccagggcgagaacgacccgtaccgcatggtgcag
cagctgcgtcgtcacgtgtcgaaggcgatcgagcagaagtacaagcgcgagcctgtcatc
ctgcccacggtcgtgccgatggcggccgacaacggcgacggcgccccgatcgaggacgac
gaggtcttctcctcccgcgagtcgctctaa
DBGET
integrated database retrieval system