KEGG   Corynebacterium liangguodongii: C3E79_06720
Entry
C3E79_06720       CDS       T07317                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
clia  Corynebacterium liangguodongii
Pathway
clia03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C3E79_06720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clia03019]
    C3E79_06720
Messenger RNA biogenesis [BR:clia03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C3E79_06720
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AWB84208
UniProt: A0A2S0WEK7
LinkDB
Position
complement(1395603..1397672)
AA seq 689 aa
MNEPRNRARKVTRKAGPPEPADQQPVFQAPEQASGSESGSRKGGGESADAGRGDGADGRN
NNGNNGNNNNGGGRGRRRGRGRGGSNGGANNNGGNRRNPMKGMQGADLTKRLPAPPQAPR
NGLRIYALGGISEIGRNMTVFEYNGRLLVVDCGVLFPNSGEPGVDLVLPDFGPIENKLDK
IEALVVTHGHEDHIGAIPWLLKLRPDIPIYSSRFTNALIAAKTKEHRQRPKLHEVNKDSE
LTLGPFRVRFWHVGHSIPECLGVSIKTGAGHVVMTGDIKLDQTPYDGKPTDLPALSRFGD
EGIDLFMCDSTNATIPGISSSEKGIEDNLTRLVQGAKQRVIIASFASNVARVQMAVNAAV
ANGRKVAFNGRSMIRNMEIAEKMSLLRAPKGTIIPIEEAAKMAPHKVVLITTGTQGEPMA
ALSRMSRREHRQITVRDGDLIILSSSLIPGNEEAVFAVINNLAQIGATVITNSDAHVHAS
GHGYAGELLFLYNAARPRGAMPVHGEWRHLRANKELAISTGVKPENTALAQNGVVVDMID
GKISVVGQYQVGQLYVDGETMGDVDLDVLADRTSLASGGVVSITCVINDRTGRLLETPRV
STTGFSDDDRDFNKKVAEGVENVMNDLAAQGENDPYRMVQQLRRHVSKAIEQKYKREPVI
LPTVVPMAADNGDGAPIEDDEVFSSRESL
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgaacgaaccccgcaaccgcgcccgtaaggtcacccgcaaagcgggtcccccggaaccg
gctgatcagcagcccgtctttcaggcccccgagcaggcgtccggatcagagtccggctcc
cgcaagggcggcggagagtcggccgatgctgggcgcggcgatggcgccgatggtcgcaac
aacaacggcaacaacggcaacaacaataatggcggcggtcgcggacggcgccgcggccgg
ggccgcggcggcagcaacggtggcgcgaacaacaacggcggcaaccgtcgcaacccgatg
aaggggatgcagggcgcggatttgaccaagcgcctcccggccccgccgcaggctccgcgc
aacgggctgcgtatctacgcgctcggcgggatctccgagatcggccgcaacatgaccgtt
tttgagtacaacggccgcctcctcgtcgtcgactgcggcgtgctgttcccgaactctggc
gaaccgggcgtcgatctcgtgctgccggatttcgggccgatcgagaacaaactcgacaag
atcgaggcgctcgtggtcacgcacggccacgaggaccacattggagcgatcccgtggctg
ctgaagctgcgcccggacatcccgatctactcgtcgcggtttaccaacgcgctcatcgcg
gcgaagacgaaggagcaccgccagcgcccgaagctccacgaagtgaacaaggactccgag
ctcaccctcggcccgttccgcgtgcgcttctggcacgtcggtcactccatcccggagtgc
ctcggcgtgtccatcaagacgggcgcggggcacgtggtgatgacgggcgatatcaagctc
gaccagacgccttacgacggcaagccgaccgaccttcccgcgctctcgcgcttcggcgac
gaaggcatcgatctgttcatgtgcgattccaccaacgcgacgatcccggggatttcctcg
tccgagaagggcattgaggacaacctcacccgcctggtccagggcgcgaagcagcgcgtg
atcattgcttcgttcgcctccaacgtcgcccgcgtgcagatggcggtcaacgcggcggtg
gcgaacgggcgcaaggtggccttcaacggacgctcgatgatccgcaacatggaaatcgcg
gagaagatgagcctgctgcgcgccccgaagggcaccatcatcccgatcgaggaggccgct
aagatggccccccacaaggtcgtgctcatcaccaccggcacccagggcgagccgatggcc
gcgctctcgcgcatgtcgcggcgcgagcaccgccagattacggtgcgcgacggtgacttg
atcatcttgtcctcgtcgctcatcccgggcaacgaggaggcggtcttcgccgtgatcaac
aacctcgcgcagatcggtgcgacggtgattacgaactccgacgcccacgtccacgcctcg
ggccacggctacgcgggcgagctgctcttcctctacaacgcggcgcgcccgcggggtgcg
atgccggtgcacggtgagtggcgccacctgcgtgcgaacaaggagctggcgatctcgacg
ggcgtgaagccggagaacaccgccctagcgcaaaacggcgtcgtggtggacatgatcgac
ggcaagatcagcgttgtcggccaataccaggtcggccagctctacgtggacggagagacg
atgggcgacgtggacctggatgtcttggcggatcgcaccagcctcgcctccggcggtgtc
gtctccatcacctgcgtgatcaacgatcgcacgggacggctcctcgagaccccgcgcgtg
tccacgacgggcttctcggacgacgaccgcgacttcaacaagaaggttgccgagggcgtg
gaaaacgtcatgaacgacctcgccgcccagggcgagaacgacccgtaccgcatggtgcag
cagctgcgtcgtcacgtgtcgaaggcgatcgagcagaagtacaagcgcgagcctgtcatc
ctgcccacggtcgtgccgatggcggccgacaacggcgacggcgccccgatcgaggacgac
gaggtcttctcctcccgcgagtcgctctaa

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