Nitratidesulfovibrio liaohensis: KPS_000003
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Entry
KPS_000003 CDS
T09362
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
clih
Nitratidesulfovibrio liaohensis
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clih03009
]
KPS_000003
Ribosome biogenesis [BR:
clih03009
]
Prokaryotic type
ribosomal protein modification factors
KPS_000003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_16
TPR_8
TPR_9
TPR_12
TPR_6
TPR_14
ANAPC3
TPR_19
ARM_TT21_2nd
Motif
Other DBs
NCBI-ProteinID:
WMW65529
LinkDB
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Position
complement(2893..4647)
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AA seq
584 aa
AA seq
DB search
MIKLSPCPKGYTKDQDKATSPVETVRRVRQRLASLDVDILAETRRVDVDRLGIPVFLSMC
GADAKRVMPTRKQMGKGASVEQAEASALMELMERYSFFTFWRDMPDMVEATWSEAQARFG
DALLPVEEIAKSVHDPIAPHDAVRALDLIRWKFFPATIIPRDGSEGREVWLPLDWFKKLG
EFNGSSAGNTEEESILQGACELVERHVCCIIDETMPELPTIDISPDGSGDDAVLRDLLDR
FARHGVQVVLKDFSLGLPVPTVGAVAWDPATFPVRSEIVYTAGTAATPVKAAVRALTEIA
QLAGDFITSACYEASGLPKYERLEDIEWLRRGPMVPLSSLPTVESDDILRELTALSDGLA
QQGYTLLSISTRNPDADVSTHYNIVPGFRFRERDKNASIGLFVGRILSEEADAETALRGL
EVLAGIYPGAHFVPFFRGMLALRAEALDEARHWFETSEPLQPDADARGLAAFYGAYVHTL
AQDWAAALPGLDRAVAACPEMKEYFNLRGVCHFKLGDYAKAAANFESVLHLDKGSVIDLA
NLGLCHKFLGDADTAAHLLEAALEIDPSLDFARTHLAELQAQAG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagctctctccctgccccaagggctataccaaggaccaggacaaggccacctcg
cccgtggaaaccgtgcgccgcgtgcgccagcgccttgccagcctcgacgtggacatcctt
gccgaaacccgccgcgtggacgtggaccggctgggcattcccgtgtttctcagcatgtgc
ggggccgacgccaagcgcgtcatgcccacccgcaagcagatgggcaagggcgcgtccgtg
gagcaggccgaggcatcggccctgatggaactgatggagcgctacagcttcttcaccttc
tggcgcgacatgcccgacatggtcgaggctacttggagcgaggcgcaggcccgcttcggc
gatgcgctgctgcccgtggaagaaatcgccaaatccgtgcacgaccccatcgccccgcac
gacgccgtgcgcgccctggacctgatccgctggaagttcttccccgccaccatcatcccg
cgcgacggcagcgaaggccgcgaggtgtggctgccactggactggttcaagaagctgggc
gagttcaacggctcgtcggcgggcaacaccgaagaggaatccatcctccagggcgcctgc
gaactggtggaacgccatgtgtgctgcatcatcgacgaaaccatgcctgagctgcccacc
atcgacatctcgcccgatggttccggtgacgatgccgtgctgcgcgacctgctggaccgc
tttgcccggcacggcgtgcaggtggtgctgaaggacttttcccttggcctgcccgtgccc
accgtgggcgccgtggcctgggacccggccaccttcccggtccgctccgaaatcgtctac
accgccggcacagccgccaccccggtcaaggccgccgtgcgcgccctgaccgaaatcgcc
cagcttgcgggcgacttcatcaccagcgcctgctacgaggcctccggcctgcccaagtac
gaacggctggaagacatcgaatggctgcggcgcggccccatggtgccgctgtcctcgctg
cccaccgtggaatcggacgacatcctgcgcgagctcaccgccctttccgacggcctcgcg
caacagggctacaccctgttgtccatctccacccgcaaccccgacgcggacgtgtccacc
cactacaacatcgtgccggggttccgctttcgcgaacgggacaagaacgcctccatcggc
ctgttcgtgggccgcatcctgagcgaggaagccgacgccgaaaccgccctgcgcggcctg
gaggtgctggcagggatataccccggcgcgcacttcgtgccgttcttccggggcatgctg
gccctgcgcgccgaagccctggacgaggcgcgccactggttcgaaaccagcgagcccctg
cagcccgacgccgacgcgcgcggccttgccgccttctacggcgcctacgtgcacaccctg
gcccaggactgggccgccgccctgcccggccttgaccgcgccgtggccgcctgcccggaa
atgaaggaatacttcaacttgcgcggcgtgtgccacttcaagctgggcgactacgccaag
gccgccgccaacttcgaaagcgtgctgcacctggacaaggggtccgtcatcgacctcgcc
aacctgggcctgtgccacaagttcctcggcgatgccgacaccgccgcgcacctgctggaa
gccgccctggaaatcgatccctccctcgactttgcccgcacccatcttgcggagttgcag
gcccaggcggggtag
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