Nitratidesulfovibrio liaohensis: KPS_000124
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Entry
KPS_000124 CDS
T09362
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPS_000124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clih03021
]
KPS_000124
03400 DNA repair and recombination proteins [BR:
clih03400
]
KPS_000124
Enzymes [BR:
clih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPS_000124
Transcription machinery [BR:
clih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPS_000124
DNA repair and recombination proteins [BR:
clih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPS_000124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Spectrin_7
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WMW65635
LinkDB
All DBs
Position
119697..120740
Genome browser
AA seq
347 aa
AA seq
DB search
MLIKQGDRLINTRNWSELVKPEQITRDSDPADAMYGKFVCEPLERGYGTTIGNALRRVLL
SSLQGAAFVSVKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKG
AVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIK
LDSSFAPVRKVAYTVEQARVGQMTNYDKLIIEVWTDGSVTPEDAIAYSAKIIKDQISVFI
NFDERISGESSGNSSGSSDLNENLFKGIDELELSVRATNCLKSANITLVGELVQKSENEM
LKTKNFGRKSLDEIKRVLSDMNLDFGMKVDGFEKKYQEWKRKQQNEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaacaaggcgacaggcttatcaacacccggaactggtcggagctcgtgaag
cccgaacagatcacccgggacagcgacccggccgatgccatgtacggcaagttcgtatgc
gaaccgctggaacgtggctacggcaccaccatcggcaacgcgttgcgtcgggttctgctg
tcgtcgcttcagggcgcggcgttcgtctcggtgaaggtctcgggcgtgcagcacgagttc
accaccattcccggcgtgcttgaggacgtgaccgacatcgtcctcaatctgaagcaggtg
cgtcttgccatggacacggacgagccccagttcctggagctttccgtgaacaagaagggc
gcggtgaaggccggcgacatcaagaccaaccaacacgtgatggtcctcaaccccgacctg
cacatcgccacgctgaccgaagacctcgaactcaccttcgagttcgaggtgcgcatgggc
aagggctacgtgcccgcggacatgcacgaaggcctcagcgaagagatcgggctgatcaag
ctggattccagcttcgccccggtccgcaaggtcgcctacacggtggagcaggctcgcgtc
ggccagatgaccaactacgacaagctcatcatcgaggtctggaccgacggttccgtgacc
cccgaagatgcgattgcgtacagtgccaagatcatcaaggaccagatatccgtcttcatc
aacttcgatgagcgcatttcgggtgaaagttccggcaattcgtcgggcagcagcgacctt
aacgagaacctgttcaagggtatcgacgagctcgaactgtccgtgcgcgccaccaactgc
ctgaagagcgccaacatcaccctggtgggcgaactggttcagaagtccgagaacgaaatg
ctgaagaccaagaacttcggtcgcaagtcgctggatgaaatcaagcgcgtgctgtccgac
atgaacctggacttcggcatgaaggtcgacggcttcgagaagaaataccaggaatggaag
aggaagcagcaaaatgaggcatag
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