Nitratidesulfovibrio liaohensis: KPS_000152
Help
Entry
KPS_000152 CDS
T09362
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih03030
DNA replication
clih03430
Mismatch repair
clih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPS_000152 (dnaE)
03430 Mismatch repair
KPS_000152 (dnaE)
03440 Homologous recombination
KPS_000152 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clih03032
]
KPS_000152 (dnaE)
03400 DNA repair and recombination proteins [BR:
clih03400
]
KPS_000152 (dnaE)
Enzymes [BR:
clih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPS_000152 (dnaE)
DNA replication proteins [BR:
clih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPS_000152 (dnaE)
DNA repair and recombination proteins [BR:
clih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPS_000152 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WMW65659
LinkDB
All DBs
Position
complement(149798..153310)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSDFVHLHCHTEYSLLDGAIRLKDLCAKAVDFGMPAAAITDHGNLYGAVYFYNTCKQFGI
KPIIGCEVYVANDHTDKTSELARVRHHLVLLARDNEGYHNLVKLVSHGFLHGFHYKPRVD
MDLLRQYSGGITALSACLAGQVPRALLRSGMDDAIRIAREYEAIYPGNFYLELQSNGLKE
QDELNEKLIELADHTGLPLVATNDCHYLEASDVEAHDVLLCIQTQAKVDDERRMRFETKE
LYYKSPEEMEKAFAHVPDAVANTGRIAEQCAVKFEFGKYVFPVYALPEGMTLEDEFRRLS
REGLKRRLERHPNRDTIDHDLYWKRLELELDVIGQMGFPGYFLIVQDFINWAKDNGIPVG
PGRGSAAGSLVAWSLRITNLDPIPYNLLFERFLNIERVSMPDIDVDFCERRRTEVIRYVG
EKYGEDMVAQITTFGKMKAKAVVRDVGRALGMTFAETDRIAKLVPEDLKMTVKKAIDAEP
DLAALYKTDPQIRKLLDVSMRLEGLSRHASTHAAGVVVSDRPMRDYLPLYRGKKGEIVTQ
FDMKMVEKVGLVKFDFLGLRTMTLVQDSLDEIARQGKTPPDLDTLALDDAETYELYSRGD
TDGIFQVESSGMRQYLRMLKPSCFDDVIAMLALYRPGPLGSGMVDEFIKRKHGEVPVTYP
LPSLEDCLRDTYGVIVYQEQVMQIAQIAAGYTLGGADLLRRAMGKKNAEEMGQQRIKFVE
GAQKNGVPKATADEIFDLMEKFAEYGFNKSHSAAYALISYYTAYLKVHFPTEFMAALLTS
EMGNQDKLLKYVAACKDMGIAVLQPNVQASRREFTVHEGAIVFGLGGIKNVGDEAIREIV
DAREEGGVFASLLDLCMRVNLRKVTKRVLESLIKGGACDCLGCTRAGMLAALDNVVSKAQ
KRLKDKESNQVSLFTMVPEEPAVCPGIGFDCEEQQAQEWDDDQKLRFEKEALGFFLTSHP
LQPYRKELFRLRLTPLEETRDMAPGMSLKTAVLVTGIKEHMTKKGARMAFLQVEDLTASG
ECVFFPEPYAEFRELLKSDQPLLLEATISKQQNDDGGRNGGGGDGSMPMSEEDDDTPREI
KLLGDKVIPLARACGASDQPVTIDMPLPRVEPASLAALRAILERHRGPVPVNVRLVVDES
ECLLQFGPQWMVQPGPAFETDIAHWTEGPE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttcgttcatctgcattgccacaccgaatacagcctgctcgacggggccatc
cgcctgaaggacctgtgcgccaaggcggtggacttcggcatgcccgccgccgccatcacc
gaccacggcaacctttacggcgcggtctatttctacaatacctgcaagcagttcggcata
aagcccatcatcggctgcgaagtctacgtggccaacgaccacacggacaagacctcggag
ctggcccgcgtgcgccaccacctggtgcttctggcgcgtgacaacgaaggctaccacaac
ctggtcaagctggtatcccacggctttctgcacggctttcactacaagccgcgcgtggac
atggacctgctgcgccagtactcgggcggcatcaccgccctttccgcctgcctggccggg
caggtgccgcgcgcgctcctgcgcagcggcatggacgacgccatccgcatcgcccgcgaa
tacgaagccatctaccccggcaacttctatctcgaattgcagtccaacggcctgaaggaa
caggacgagctgaacgagaagctcatcgagctcgccgaccacaccgggctgcccctggtg
gccaccaacgactgccactacctggaagccagcgacgtggaagcccacgacgtgctgctg
tgcatccagacccaggccaaggtggacgacgagcgccgcatgcgcttcgagaccaaggag
ctgtactacaagtcgccggaggaaatggaaaaggcgttcgcccacgtgcccgacgccgtg
gccaacaccgggcgcatcgccgagcagtgcgcggtgaagttcgaattcggcaagtacgtc
tttcccgtgtatgccctgccagagggcatgaccctggaggacgagtttcgccgcctctcg
cgcgaagggctgaagcgccgcctggaacgccaccccaaccgcgacaccatcgaccatgac
ctgtactggaagcgccttgagctggaacttgacgtcatcggccagatgggctttcccggc
tacttcctcatcgtgcaggacttcatcaactgggccaaggacaacggcattcccgtgggt
ccggggcgcggttccgccgccggttcgctggtggcgtggtcgctgcgcatcaccaacctc
gatcccatcccgtacaacctgctgttcgaacgcttcctgaacatcgaacgcgtgtccatg
cccgatatcgacgtggacttctgcgaacgccgccgtacagaggtcatccggtacgtgggc
gagaagtacggcgaagacatggtggcgcagatcaccaccttcgggaagatgaaggcgaaa
gcggtggtgcgcgacgtgggccgcgccctgggcatgacctttgccgagaccgaccgcatc
gccaagctggtgcccgaagacctgaagatgacggtcaagaaggccatcgacgcggaaccg
gacctggccgcgctgtacaagaccgatccgcagatccgcaagctgctggacgtttccatg
cggcttgaagggctttcgcgccacgcctccacccacgctgcgggcgtcgtggtttccgac
aggcccatgcgcgactacctgccgctgtaccggggaaaaaagggtgaaatagtcacccag
ttcgacatgaagatggtcgagaaggtcgggctggtgaagttcgacttcctcggcctgcgc
accatgaccctggtgcaggattcgctggacgagatcgcccggcagggcaagaccccgccc
gacctcgacaccctggccctggacgacgcggaaacctacgaactttactcgcgcggggac
accgacggcatcttccaggtggaaagttcgggcatgcgccagtacctgcgcatgctcaag
ccgtcctgcttcgacgacgtcatcgccatgctggccctgtaccggcccggcccgctgggt
tcgggcatggtggacgaattcatcaagcgcaagcacggcgaggtgcccgtcacctacccc
ctgccctcgctggaagactgcctgcgcgatacctacggcgtcatcgtgtaccaggaacag
gtgatgcagatcgcccagatcgcggcgggctacaccctgggcggcgcggaccttctgcgc
cgcgccatgggcaagaagaacgccgaggaaatgggccagcagcgcatcaagttcgtggag
ggagcgcagaagaacggggttcccaaagccacggccgacgaaatcttcgacctgatggaa
aagttcgcggagtacggcttcaacaagtcgcacagcgcggcctatgcgctcatctcgtac
tataccgcgtacctgaaggtgcactttcccaccgaattcatggccgccctgctcacgtcg
gaaatgggcaaccaggacaagctgctgaagtacgtggccgcgtgcaaggacatgggcatc
gccgtgttgcagcccaacgtgcaggccagccgccgcgaattcaccgtgcacgagggggcc
atcgtcttcggccttggcggcatcaagaacgtgggcgacgaagccatccgcgaaatcgtg
gatgcccgcgaggaaggcggggtgttcgcctcgctgctggacctgtgcatgcgcgtgaac
ctgcgcaaggtgaccaagcgcgtgctggaaagcctgatcaagggcggcgcgtgcgattgc
ctgggctgcacccgcgcgggcatgctggccgcgctggacaacgtggtcagcaaggcccag
aagcgcctgaaggacaaggaatccaaccaggtttcgctgttcaccatggtgccggaagaa
cccgccgtgtgccccggcatcggctttgactgcgaagagcagcaggcccaggagtgggac
gacgaccagaagctgcgcttcgaaaaggaggcgctgggcttcttcctgaccagccacccg
ctccagccctaccgcaaggaattgttccgcctgcgccttaccccgctggaagaaacgcgg
gacatggcccccggcatgtcgctgaagaccgccgtgctggtcaccggcatcaaggagcac
atgaccaagaagggcgcgcgcatggcctttttgcaagtggaagaccttaccgcgtccggc
gaatgcgtgttctttcccgagccgtacgcggagttccgcgaactgctgaagtccgaccag
ccgctcttgctggaggccaccatcagcaagcagcagaacgacgacggcggcaggaacggc
gggggcggtgacgggtccatgcccatgtccgaggaagacgacgacaccccgcgcgaaatc
aagctgctgggcgacaaggtcattccgctggcccgcgcctgcggcgccagcgaccagccc
gtgaccatcgacatgcccctgccccgcgtggagcccgccagccttgccgccctgcgcgcc
attctggagcggcatcgcggcccggtgccggtgaacgtgcgcctggtggtggacgagtcc
gaatgcctgttgcagttcggcccgcagtggatggtgcagcccggcccggcgttcgagacg
gatatcgcgcattggaccgaaggccccgagtag
DBGET
integrated database retrieval system
