Nitratidesulfovibrio liaohensis: KPS_001157
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Entry
KPS_001157 CDS
T09362
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih00470
D-Amino acid metabolism
clih00550
Peptidoglycan biosynthesis
clih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KPS_001157 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KPS_001157 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clih01011
]
KPS_001157 (murD)
Enzymes [BR:
clih01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KPS_001157 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
clih01011
]
Precursor biosynthesis
Amino acid ligase
KPS_001157 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
Thi4
FAD_oxidored
Pyr_redox
GIDA
DAO
Pyr_redox_2
HI0933_like
Pyr_redox_3
SIS_2
TrkA_N
FAD_binding_2
2-Hacid_dh_C
DUF6214
YjeF_N
XdhC_C
NAD_Gly3P_dh_N
DUF3606
NmrA
Motif
Other DBs
NCBI-ProteinID:
WMW66565
LinkDB
All DBs
Position
complement(1311631..1312968)
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AA seq
445 aa
AA seq
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MTCDKHTAQTIGKGDLVVVVGAGRSGMAAARLLHRMGARVRLLERNADGVPADFVRWASE
AGVEIATGDHAPTQFEGARAVVPSPGMAVAKLRPLLPQGPDAPEIMAEMELARRQLDGEP
VLAVTGTSGKTTTVSLCAAMLREQGLSVFLGGNIGTPLSEYVLSVAHGGADEQGRADVLV
IEISSFQLQACTTFRPRVAMLLNISENHLDYHADMAEYIDAKFRLFRCMEEGDLAIFGQG
VHGLVAARDLKPRTLFFDAAARRFPRTRLLGGHNQANIEAAWQACREFGVTPEAAEKAVA
DFAPLEHRLEAVAVRNGVLWVNDSKCTTVEALRVALQAFDRPVVLMVGGKFKGGDLVSLL
PLMHGRVRAVVGFGASREHFEGAWMGQGDFSMSWHPALDLAVAEAAGLARPGDAVVMAPA
TSSFDLFANYKERGHAFRRAVEALP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcgacaagcacacggcgcaaaccatcggcaagggcgaccttgtggtggtcgtg
ggcgcgggccgctccggcatggctgccgcgcggctgctgcaccgcatgggggcgcgcgtg
cgcctgctggaacgcaacgccgacggggtgcccgccgactttgtgcgctgggcctcggaa
gccggggtggaaatcgccaccggcgaccatgcgccgacacagttcgaaggcgcccgggcc
gtggtgcccagccccggcatggccgtggcaaagctgcgcccgttgttgccgcaggggccg
gacgctccggaaatcatggccgaaatggagcttgcccggcggcaactggacggcgagccg
gtacttgccgtcaccggaaccagcggcaagaccaccacggtttcgctgtgcgccgccatg
ctgcgcgagcaggggctttccgtgttcctcggcggcaacatcggcacccccctcagcgag
tacgtgttgtccgtagcgcatggtggggcggacgagcagggcagggccgacgtgctggtc
atcgagatttccagcttccagttgcaggcctgcaccacctttcgcccgcgcgtggccatg
ctgcttaacatcagcgagaaccacctcgactaccacgccgacatggcggaatacatcgac
gccaagttccggctgttccgctgcatggaggaaggtgacctggccatcttcggccagggt
gtgcatggcctggtggccgcccgcgacctgaagccccgcacgctgttcttcgacgcggcg
gcccggcgctttccgcgtacccgcctgttgggcgggcacaaccaggccaacatagaggcc
gcatggcaggcctgccgcgagttcggcgtgacgccggaggcggcggaaaaggccgtggcg
gacttcgcaccgctggaacaccggctggaggccgtggccgtgcgcaacggcgtgctgtgg
gtgaacgattccaagtgcaccacggtggaagccctgcgcgtggccctgcaagccttcgac
aggcccgtggtgctgatggtgggcggcaagttcaaggggggcgaccttgtgtccctgctg
ccgctcatgcacgggcgggtgcgggccgtggtgggctttggcgccagccgcgaacatttc
gagggggcctggatggggcagggcgatttttccatgtcctggcatcccgcccttgacctc
gccgtggccgaggccgccgggctggcccggccgggcgacgcggtggtgatggccccggcc
acctccagtttcgaccttttcgccaactacaaggagcgcggccacgccttccgccgcgcg
gtggaggccctgccatga
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