Nitratidesulfovibrio liaohensis: KPS_001403
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Entry
KPS_001403 CDS
T09362
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih03410
Base excision repair
clih03430
Mismatch repair
clih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KPS_001403 (recJ)
03430 Mismatch repair
KPS_001403 (recJ)
03440 Homologous recombination
KPS_001403 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clih03400
]
KPS_001403 (recJ)
DNA repair and recombination proteins [BR:
clih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KPS_001403 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KPS_001403 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KPS_001403 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WMW66788
UniProt:
A0ABY9R4V8
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All DBs
Position
complement(1575121..1576836)
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AA seq
571 aa
AA seq
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MTRDWIFRPEPVAASPPFAAWAERLEVSELIVRLLWRRGVGSVDDMALYLSPNLRHLAPL
AEWPGLEQAASTLTEGLLAGLPFAVWGDYDVDGVTSSALVKGVLAHHGIEAAHHIPDRRE
EGYGLNVAWIERLAEQGVRLLLTVDCGISDVEPVRRARELGMTVVVSDHHMPPEGLPDAH
AICNPRLAECPCPALAGVGVSFLVMAAVNAALSERTGKKADMRDYLDLVALGTLADVVNL
HGQNRILVKNGLLKIAEARRPGMAALKTVSGYNPSAAIGAGQVVFGLAPRINAAGRMGKA
ELALKLLLTDDHAEAASLAQELDAENARRRAEEDRILDAAKKQAEGQLDRMGLVLHGEDW
HPGVIGIVASRIVDEFYRPTLILSRDGESMKGSGRSVAEFDLHAGLTRCADLFTSFGGHH
QAAGMSMAASHVDTLRERFDAVVRAELGDTPLAPRLKLDGELGFALAGDFTLLKELEMLQ
PFGTGNAEPVFASPPVLVRDLRRFGPTRDHVELQLTDESCGITLRAKAWRQSGQFPDSLR
GTRVRLAYTPRIDRYNGAASVDLRIKDWKRE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtgattggatattccgcccggaacccgtggcggcctctcctccttttgccgca
tgggcagagcggttggaagtatcggaactcatcgtgcggctgctgtggcggcgcggggtg
gggtctgtggacgacatggccctgtacctttcgcccaacctgcggcacctggccccgctg
gctgaatggccggggttggaacaggcggccagcaccctgaccgagggcctgctggccggg
ctgccctttgccgtgtggggtgactatgacgtggacggggtgacatcttcggctctggtc
aaaggagtgcttgcccatcacggcatcgaggcggcgcaccacattccggaccggcgcgag
gaaggctacggcctgaacgttgcgtggattgagcgcctggcagagcagggcgtgcgcctg
ctgctgaccgtggactgcggcatatcggacgtggagccggtgcgccgggcgcgcgaactg
ggcatgacggtggtggtgtccgaccaccacatgccgcccgaaggcctgcccgatgcccac
gccatctgcaacccgcgcctggcggaatgtccgtgcccggctctggccggggtgggggta
agctttctggtcatggcggcggtgaacgcggccctgtccgagcgcaccggcaagaaggcc
gacatgcgcgactatcttgatctggtggcgctgggcaccttggccgacgtggtgaacctg
cacgggcagaaccgcatcctggtcaagaacggcctgctgaagatagcggaggcccgccga
cccggcatggccgcgctgaagaccgtgagcgggtacaacccgtcggcggccatcggcgcg
gggcaggtggtgttcggccttgcgccgcgcatcaacgcggcggggcgcatgggcaaggcg
gaactggccctgaaactgctgctgaccgacgaccacgccgaggcggccagcctggcccag
gaactggacgcggaaaacgcccgccgccgggcagaggaagaccgcatcctggacgccgcg
aaaaagcaggccgaagggcaactggaccgcatgggccttgtgctgcacggcgaggactgg
caccccggcgtcatcggcatcgtggcctcgcgcatcgtggatgaattctaccggcccacg
ctgatattgagccgcgacggcgaatccatgaagggctcgggccgttcggtggcggaattc
gacctgcatgccgggctgacccgctgcgccgacctgttcacctcgttcggggggcaccat
caggcggcgggcatgagcatggccgccagccacgtggataccctgcgcgaacggttcgat
gccgtggtgcgggcggaactgggcgacaccccgcttgccccgcgcctgaagctggatggc
gaactgggctttgccttggcgggcgatttcaccctgctgaaggaactggaaatgctccaa
cccttcggcacgggcaacgcagagccggtgtttgcctcgccgccggtgctggtgcgcgac
ctgcgccgctttggccccacgcgcgaccacgtggaactgcaactgaccgacgagagttgc
ggcattaccctgcgggccaaggcgtggcgccagtccggccagtttccggacagcctgcgc
ggcacgcgggtgcgcctggcctacactccgcgcatcgacaggtacaacggcgcggcgtct
gtggatttgcggatcaaggactggaagcgggagtaa
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