Nitratidesulfovibrio liaohensis: KPS_002186
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Entry
KPS_002186 CDS
T09362
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
clih
Nitratidesulfovibrio liaohensis
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clih03016
]
KPS_002186
Enzymes [BR:
clih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KPS_002186
Transfer RNA biogenesis [BR:
clih03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KPS_002186
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
RNB
DUF5810
Motif
Other DBs
NCBI-ProteinID:
WMW64194
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All DBs
Position
2540414..2542621
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AA seq
735 aa
AA seq
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MAAPSGIVRYPGPGCIVEFMQGNRPITAWVLEEQAGKLRLLLANRRETKLTTNRLLPWSG
PVYSGEYGRQQIIDLLELHRQRRDDRETALDPLELWSMAQGEVDRASLEWFAELLWEAPE
VDDLAALGRAMLACKTHFKFQPPDFEVYTAEKVDARLAEQEATRQREALVAAGHEFVRVL
WDVHSRRRTLPLENSPERPAPDIAEQLAALVMTRLADPDEHDSEAVWKQVTKGLPDDPHL
ALHLAKTWGLVPEHHNFWMDRAGYDPGNAWAASHADDIAALRAAVESARSQPLATPFISI
DSATTRDIDDAFHIEARGDGGFRLWLALACPALAWPYGSELDKAVLRRATSIYLPEATHH
MLPEELGIGFFSLLAGQDRPALVLTMEVAPDGELQSCVPSGAWVNLAANLTYEACEACLA
AVAPPQAAPNPDDDLLAAMLAGDPDADAAAPAAAAAPLPLPDNAAAAHAEQLAVADRLAR
ALQSHRIGRGAVIIERDDPKVTLSGEGSATIVNIADQPVTPRSQSIVAEMMILANAGVAR
WAGENRVALLHRTQDVGIPREYAGVWRAPHEVARVVKALASSLLETSPRPHAGIGVPAYS
PVTSPLRRYPDLINETRVLHALATGQGRWTREELDAMLPLLNARLDAAGQVQRFRPRYWK
LLHFRQKGDKTWWHAVVTEENDAFVTVSLPREQLFLRGRRSTFGDKVNPGQHFRVRVGKI
HPLNNEIQILDAEEE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccatccggcatcgtgcgctaccccggcccggggtgcatcgttgaattcatg
cagggcaaccgccccataacggcctgggtgctcgaagaacaggcaggcaagctgcgcctg
ctgctcgccaaccgccgcgaaacaaaacttaccaccaaccgcctgctgccctggtccggc
ccggtctactccggcgaatacggccgccagcagatcatcgacctgctggaactgcaccgc
cagcgccgcgacgaccgcgaaaccgcgctcgacccgctggaactctggtccatggcccag
ggcgaggtggaccgcgcctcgctggaatggttcgcggaactcttgtgggaagcgcccgaa
gtggacgacctggccgcccttggccgcgccatgctggcctgcaagacccacttcaagttc
cagccgcccgacttcgaggtgtacaccgccgaaaaggtggacgcccgcctggccgaacag
gaagccacccgccagcgcgaagccctggttgccgccgggcacgaattcgtgcgcgtcctg
tgggacgtgcactcgcgccgccgcaccctgcccctggaaaattcgccggaacgcccggcc
ccggacatcgccgagcagctggccgcactggtcatgacccgcctggccgacccggacgag
cacgactccgaggcggtctggaaacaggtgaccaagggcctgcccgacgacccgcatctg
gccctgcacctggccaagacctggggcctggtgccggagcaccacaatttctggatggac
cgcgcgggctacgaccccggcaatgcctgggcagccagccacgcggacgacatcgccgcg
ctgcgcgcagccgtggaatccgctcgcagccaaccgctggccaccccgttcatatccata
gattccgccaccacccgcgacatcgacgacgcctttcatatcgaggcgcgcggcgacggg
ggctttcgcctgtggctggccctggcctgcccggcgctggcctggccctacggcagcgaa
ctggacaaggcagtgctgcgccgcgccaccagcatctacctgccggaagccacccaccac
atgctgcccgaggaactgggcatcggcttcttcagcctgctggccgggcaggaccgcccc
gcgctggtcctgaccatggaagtggccccggatggcgaactgcaatcctgtgtgcccagc
ggcgcgtgggtgaacctggcggccaaccttacctatgaggcctgcgaggcctgccttgcc
gccgtggccccgccgcaggccgccccgaacccggacgacgacctgctggcggccatgctg
gcgggcgaccccgatgcggatgccgcggccccggctgccgcggccgcgccccttcccctg
ccggacaacgcggctgcggcccatgcagaacaactggccgtggccgacaggctggcccgc
gccctgcaatcccaccgcatcgggcgcggagcggtgatcatcgaacgcgacgatccgaaa
gtgacgttatccggtgaaggctccgccaccatcgtgaacatcgcggaccagccggtcacg
ccgcgcagccagtccatcgtggcggagatgatgatcctcgccaacgccggggtggcccgc
tgggccggtgaaaaccgcgtggccctgctgcaccgcacccaggacgtgggcatcccccgc
gaatacgccggggtgtggcgcgccccgcacgaggtggcgcgggtggtcaaggccctcgcc
tcgtcgctgctggaaacctcgccccggccccatgcgggcatcggggtgcccgcgtacagc
ccggtcacctcgccgctgcgccgctacccggacctgatcaacgaaacccgggtgctgcac
gcgctggccaccgggcagggccgctggacccgcgaggaactggacgccatgctgcccctg
ctgaacgcccggctggacgcggcggggcaggtgcagcgctttcgcccgcgctactggaag
ctgctgcattttcgccagaagggtgacaagacttggtggcacgccgtggtcacggaagaa
aacgacgccttcgtcaccgtcagcctgccccgcgagcagttgttcctgcgcgggcggcgc
tctacctttggcgacaaggtgaaccccggccagcacttccgggtgcgggtgggcaagatc
catccgctgaacaacgaaatccagatactggacgcggaagaagagtga
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