Nitratidesulfovibrio liaohensis: KPS_002211
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Entry
KPS_002211 CDS
T09362
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih03420
Nucleotide excision repair
clih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KPS_002211
03430 Mismatch repair
KPS_002211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clih03400
]
KPS_002211
Enzymes [BR:
clih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPS_002211
DNA repair and recombination proteins [BR:
clih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPS_002211
MMR (mismatch excision repair)
Other MMR factors
KPS_002211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMW64215
LinkDB
All DBs
Position
complement(2571434..2573827)
Genome browser
AA seq
797 aa
AA seq
DB search
MIDYRNELNPAQYQAATTLEGPVLVIAGAGSGKTRTIVYRLANLVEQGVPASAILLLTFT
RKSAREMLHRAGRLLEHSATAAVHGGVHGVTGVQGGTFHAFAYSVLRQFRPSGYEAGDLT
VMDGADIVDAVRHCKDNLGIGKGDRSFPRTQNIVGLISKSRNKELDIDEVIRREAFHLLV
HAEGIGRIAAAYHAYRREHGLLDYDDLLFELERLLRERADVLDWCRAKFRYIMVDEYQDT
NLVQARLVHLLAGEGGNIMAVGDDAQSIYAFRGADVRNILDFPKLFPAAQIIKLEENYRS
VQPVLDLTNAILAEAPQAYRKKLFAAREGGDRPQVVRPLSDLTQASLVVSRIVEFLRSYP
PHDIAVLFRAGYQSYHVEVQLNKLGVKFRKYGGLRYSEAAHVKDVLSYARLVLNPLDLPA
FQRIAAMSKGVGPKTTLKLYEVARQGNPEAASRACLRYPELRADLDLLDGLRKRPHTPTS
LLEEVMEHYKPRMEAAFPDDWPRRQQGLEQLLQIAASYRDLDLFISDLSLEDPGEEEENR
DSVVLSTIHSAKGLEWGAVLLIDLVEERFPSRHAIARAEDFEEERRLMYVACTRARDHLC
LFVPASLYSRGDGGNQPAVPSPFVRELPGHLFDEMHESYSGGLMRRDVQNGQRGAGFGGG
RGGAGGVGGGGFAQGNRFDGAPGIPRPPMFAEGTVPGRAGGAGRPLPPTAYPGGTQPGVQ
GGGQSGAQPGPQSGPGVAAPSPLSGGSAPAGQCGYCTHRIFGRGKIVQHLPPDKYRVNFP
GFGLKVIMAEYLTLESD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatagattatcgaaatgaactgaatcccgcccagtaccaggccgccaccaccctggaa
ggtccggtgctggtcattgccggtgcaggcagcggcaagacgcgcaccatcgtctaccgg
ctggccaatctggtggagcagggcgtgcccgcatcggccatcctgctgctgaccttcacc
cgcaaatccgcccgcgaaatgctgcaccgggccgggcggctgctggaacacagcgccacc
gccgccgtgcacggtggggtgcacggggttaccggggtgcagggcggcacctttcacgcc
ttcgcctattcggtgctgcgccagttccgcccctcgggctacgaggcgggcgaccttacc
gtcatggacggcgcggacatcgtggacgcggtgcgccactgcaaggacaacctgggcatc
ggcaagggcgaccggtccttcccgcgcacccagaacatcgtggggctcatcagcaagtcc
cgcaacaaggaactggacatcgacgaggtgatccggcgcgaggcgttccacctgctggtg
cacgccgaaggcataggccgcatcgccgccgcctaccacgcctaccgccgcgagcacggg
ctgctggattacgacgacctgctcttcgaactggagcggttgctgcgcgaacgggccgac
gtgctggactggtgccgcgccaagttccgctacatcatggtggacgaataccaggacacc
aacctggtgcaggcccggctggtgcacctgctggcgggcgagggcggcaacatcatggcc
gtgggcgacgacgcccagtccatctacgcctttcgcggggcggacgtgcgtaacatcctg
gatttccccaagctgttccccgccgcgcagatcatcaagctggaagagaactaccgctcg
gtgcagccggtgctggacctgaccaacgccattctggcggaagccccgcaggcctaccgc
aagaagctgttcgccgcgcgcgaagggggcgacaggccgcaggtggtgcgcccgctcagc
gacctgacccaggcctcgctggtggtgtcgcgcatcgtggaatttctgcgcagctacccg
ccgcacgacatcgccgtgctgttccgggcggggtaccagtcgtaccacgtggaagtgcag
ctgaacaaactgggcgtgaagttccgcaagtacggggggctgcgctactcggaagcggcc
cacgtcaaggacgtgctgtcctacgcgcgcctggtgctgaatccgctggacctgcccgcg
ttccagcgcattgccgccatgtccaagggggtggggccaaagaccaccctgaagctgtac
gaagtggctcggcagggcaacccggaggccgccagccgcgcctgcctgcgctacccggaa
ctgcgtgccgacctggacctgctggacggcctgcgcaagcgcccgcacacgcccacctcg
ctgctcgaagaagtgatggagcactacaagccgcgcatggaagccgcctttcccgacgac
tggccgcgcaggcagcaggggctggaacaactgctccagattgccgcatcctaccgcgac
ctggacctgttcatttccgacctgtcgctggaagaccccggcgaggaagaggaaaaccgc
gacagtgttgtgctgtccaccatccactcggccaaggggttggagtggggtgcggtgctg
ctgatcgacctggtggaagagcgcttcccctcgcggcacgccattgcccgcgccgaagat
ttcgaggaagagcggcggctgatgtacgtggcctgcacccgcgcccgcgaccacctgtgc
ctgttcgtgcccgccagcctgtacagccggggcgacggcggcaaccagcccgccgtgccc
agcccctttgtgcgcgaactgcccggccacctgttcgacgagatgcacgaaagctattcc
ggcgggctgatgcgccgcgatgtgcagaacgggcaaagaggcgcgggcttcggcggcggc
aggggcggagccggtggggtaggtggcggcggattcgcgcaggggaaccgttttgacggc
gcgcccggcattccccgtccgcccatgttcgcggaagggaccgtgccgggaagggccggg
ggggcagggcgaccgctgccgccaactgcgtaccccggtggtacgcagcccggtgtgcaa
ggtggcgggcagtccggcgctcagcccggcccgcaatccgggcctggcgttgccgcgccc
tcgccgctgtcgggcggcagcgccccggcgggccagtgcgggtactgcacccaccgcatc
ttcgggcgcggcaagatcgtgcagcacctgccgcccgacaagtaccgcgtgaattttccc
ggtttcggcctcaaggtgatcatggccgaatacctgaccctggaatccgactga
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