Nitratidesulfovibrio liaohensis: KPS_002617
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Entry
KPS_002617 CDS
T09362
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPS_002617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clih03019
]
KPS_002617
03009 Ribosome biogenesis [BR:
clih03009
]
KPS_002617
Enzymes [BR:
clih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPS_002617
Messenger RNA biogenesis [BR:
clih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPS_002617
Ribosome biogenesis [BR:
clih03009
]
Prokaryotic type
rRNA helicases
KPS_002617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CARD
Motif
Other DBs
NCBI-ProteinID:
WMW64575
UniProt:
A0AA51YL88
LinkDB
All DBs
Position
complement(3052778..3055813)
Genome browser
AA seq
1011 aa
AA seq
DB search
MTHDPRLEGDAHSAADTDETPSSAPAASDVPAPAAADAPGSPDAPGTTAADTPGTPAPVA
ASDAPAEGAPSEISDPVPAIPADSADATDAAALADDEDPALRLAAEITRIDEPEDALPPV
TLADLPPMMQEAAARAGWTNLMPVQTRALPYIFAKRDLMVQSRTGSGKTGAFLLPLLERL
SPDEAAVQALILVPTRELALQVEYEARVLFEGTGLNVAAVYGGVGYGKQMDALRDGAHLV
VGTPGRVLDHLLRRTMNLDRIRALVFDEADRMLSIGFYPDMKEIQRYMPKRRISAYLFSA
TYPPHVLNLAGEFLSEPRMLSLSHQQVHVAQTQHLYCETKPMDKDRALVRIIESENPTAA
IIFCNTKANVHYVTAVLQGFGYNADELSADLTQAKREQVLGNLRKGGVRFLVATDVAARG
IDIPDLSHVILYEPPEDRESYIHRAGRTGRAGSAGTVISLVDIIQKLELQRIAKHYKIDI
QPRPTPDDESVARIAGDRLTALLEARLRARTGLERERQLRYAPLARALAGDDEQLALLAM
LLDQYYQESLHAAPPMPATAPAPRQDRRRDERRDERRDERRDERRDDRRDARREDRDGRD
GRDGRDGHRRDRDRRDELRDKRRDERPEERKGERRDERRDERTPAVAATDAPASADSPEH
PAEPREDGQAPREGRRRSRRGRGRKRRRDAEARAAQEGGQAADATQDHADGMTDDVDDAW
DDGMTAAPAAPEAPKTAPEAPGPRRDARPAKTDAPVASVDDDVEAAPAAKPAKAKPARPA
RGRTTKAATAAAATETIDVEATGAAPGTPDETDETADAKPARGARRGRGKAEATSPEKGK
AASAGKAATGGKPRAKAPERDEDEDDGMPLLLEDYLSDDDDRLDDVRGSSSAVGSVFGQR
LPSGARAQAQPGQSGRSGGKAAAKPKVAPKAASAPVQPVLTQALEGSDEFDDEFDDEFDD
QPVGNKANDAATGNAATPAKRRRRRRRKKPAGAATEGTDAGTTHQAEADAE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgacccacgccttgagggcgacgcgcactcggctgccgacaccgacgaaacc
ccttcgtccgcgcctgccgcttccgacgtgcccgcccccgcagccgctgacgcccccgga
tcccccgacgcccccggcaccaccgccgccgacacacccggcaccccggcccccgtggcc
gcttccgacgcccctgccgaaggcgccccctccgaaatttccgatcccgtgcccgcaatt
cccgcagactccgccgatgccacggatgccgccgccctggcggacgatgaagacccggcc
ctgcgccttgccgccgagatcacccgcatcgacgagcccgaagacgcgctgcccccggtg
accctggccgacctgccccccatgatgcaggaggccgccgcccgcgccgggtggaccaac
ctgatgccggtgcagacccgcgccctgccgtacatcttcgccaagcgcgacctgatggtg
cagtcgcgcacgggcagcggcaagaccggggccttcctgctgccgctgctcgaacgcctg
tcccccgacgaagccgccgtgcaggccctgatcctggtgcccacgcgcgaactggccctg
caggtggaatacgaggcccgcgtgctgttcgaaggcaccggcctgaacgtggccgccgtg
tacggcggcgtgggctacggcaagcagatggacgccctgcgcgacggcgcgcacctggtg
gtgggcacccccggccgcgtgctggaccacctgctgcgccgcaccatgaacctggaccgc
atccgggcgctggtgttcgacgaagcagaccgcatgctgtccatcggcttctatccggac
atgaaggaaatccagcgctacatgcccaagcgccgcatttccgcgtacctgttctccgcc
acctacccgccccacgtgctgaacctggcgggcgaattcctgagcgaaccgcgcatgctc
agcctgagccaccagcaggtgcacgtggcccagacgcagcacctgtattgcgaaaccaag
cccatggacaaggaccgggcgctggtgcgcatcatcgaatccgaaaaccccacggcggcc
atcatcttctgcaacaccaaggctaacgtgcactacgtgacggcggtgttgcagggcttt
ggctacaacgccgacgaactttcggcggacctgacccaggccaagcgcgaacaggtgctg
ggcaacctgcgcaagggcggggtgcgctttctggtggccaccgacgtggccgcgcgcggc
atcgacattcccgacctttcgcacgtcatcctgtacgagccgccggaagaccgcgaatcg
tacatccaccgcgcgggccgcactggccgcgccggttcggcgggcacggtcatctcgctt
gtggacatcatccagaagctggaattgcagcgcatcgccaagcactacaagatcgacatc
cagcctcgccccacccccgacgacgaatcggtggcgcgcattgccggtgaccggctgacc
gccctgctggaagcgcgcctgcgcgcccgcaccgggctggaacgcgaacggcagctgcgc
tatgcgccgctggcccgcgccctggccggggacgacgagcagcttgcgttgctggccatg
ctgctggaccagtactatcaggaaagtctgcatgcggccccgcccatgcccgccaccgct
ccggccccccgacaggatcgccgccgcgacgaacgccgcgacgaacgcagggacgagcgc
agggacgagcggcgcgatgacaggcgtgatgcccgacgcgaagaccgtgacgggcgggat
ggacgggatggtcgtgacgggcaccgccgcgaccgtgaccgccgtgacgagctacgggac
aaacgacgggacgaacgcccggaggaacgtaagggcgaacgccgggatgaacgacgcgac
gagcgcactcccgccgtggccgcaacggatgcccccgccagcgccgatagcccggaacac
cccgcggaaccgcgtgaggacggacaggccccccgcgaagggcggcgccggtcgcggcgt
ggccgtggccgcaagcgccgtcgtgacgccgaggcccgcgccgcgcaggaaggcggacag
gctgccgatgccacccaggatcacgcggatggcatgacggacgacgtggacgatgcatgg
gatgacggcatgaccgccgcacccgcagcgcccgaagcccccaagacggcgcccgaagcg
cccgggccgcgcagggatgcccgccccgccaaaaccgatgcacccgttgcatccgttgac
gacgatgtggaagctgccccggcagccaagcccgccaaggccaagcccgcgcgccccgcc
cgtggcaggacgaccaaggctgctactgccgccgctgcaacggaaacgatcgatgtcgag
gcgaccggtgccgcacccggcacccccgacgaaactgacgagaccgctgacgcaaaaccc
gcgcgcggtgcacgccgtggcagaggcaaggccgaagccaccagccccgaaaagggcaag
gccgcgtccgccggcaaagccgcgaccgggggcaagccccgcgccaaggcccctgaacgg
gacgaggacgaagacgacggcatgcccctgctgctggaagactacctgagcgatgacgac
gaccgtctggacgacgtgcgcggctcctcttcggcagtgggcagcgtgttcggccagcgg
ctgccctccggagctcgggcgcaggcccagcccggccaatccggccgctccggtggcaag
gccgccgcaaagcccaaggtggcccccaaggcggcttcggcaccggtgcagcccgtgctg
acacaggccctggaaggctccgacgaattcgatgacgaattcgatgacgaattcgacgac
cagcccgtcggaaacaaggcgaatgacgctgccaccggcaatgcggccacgcccgccaag
cgccgcaggcgccgccgccgcaaaaagcccgccggggctgcgaccgaaggtacggacgca
ggtacgacccaccaagcggaggccgacgccgaatga
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