KEGG   Nitratidesulfovibrio liaohensis: KPS_002635
Entry
KPS_002635        CDS       T09362                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
clih  Nitratidesulfovibrio liaohensis
Pathway
clih03030  DNA replication
clih03430  Mismatch repair
clih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:clih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KPS_002635 (dnaX)
   03430 Mismatch repair
    KPS_002635 (dnaX)
   03440 Homologous recombination
    KPS_002635 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clih03032]
    KPS_002635 (dnaX)
   03400 DNA repair and recombination proteins [BR:clih03400]
    KPS_002635 (dnaX)
Enzymes [BR:clih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KPS_002635 (dnaX)
DNA replication proteins [BR:clih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KPS_002635 (dnaX)
DNA repair and recombination proteins [BR:clih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KPS_002635 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNAX_ATPase_lid RuvB_N AAA_22 AAA_5 AAA_30 AAA_18 AAA_14 AAA_16 TsaE AAA_2 AAA_19 TIP49 ResIII SLFN-g3_helicase nSTAND3 SKI AAA_28 Mg_chelatase Rad17
Other DBs
NCBI-ProteinID: WMW64590
LinkDB
Position
3075197..3077230
AA seq 677 aa
MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK
ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY
KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE
HELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGERLTVEGARGV
LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE
AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLNLA
MLPRLVSLEQLSRGGGAGPAGGRGVPGGVGGAGGAGGGQPGGGAGGHGSMPPRQGGYGAQ
SGQSAQANQFGQASQLGQPGESFPQAQPPQGRYPGPGQARPQAASSVSSMTSAAGASGVP
GVPGMQPAGGFPRPERPAPAAAPAASGGGADTSLPWDDVPHPAPGAGAAPGGPAVAGVAE
ADATSGMSGASAFTPQGDATWDGFVRYCAERSNGGNGLSVLGQARGRMDGARLIVETRFR
TQYEHLCSTGNQAALAEYARAYFGAGTTVEVQPPTTRIKTPSELRAEAERHPAVGLLREQ
FGATMLSCRPLSDSQLQ
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgagcaacgcccccctcaccgccagataccgcccgcagaccttcgccgaggtggccggg
caggagacggtaaaggccatcctttcccgcgccgcggcggaagaccgcgtggccccggcc
tacctgttcagcggcacgcgcggggtgggcaagaccaccatcgcccgcatcctggccaag
gcgctgaactgcgaaaaggcccccaccggagagccgtgcaacacctgcgagcagtgccgc
aaggtggtcatgggcaaccacgtggacgtggtggaaatcgacggcgcgtccaaccggggc
atcgaggacgcccgccgcctgcgcgaggccatcggctacgcgcccatggaaggccgctac
aaggtcttcatcatcgacgaagcccacatgctgacgcgcgaggcgttcaatgccctgctg
aaaacgctggaggaacccccgccgcgcgtcaccttcgtgctggccaccacagagccgcac
aaatttcccgtgaccatcatcagccgctgccagcacttcaccttcaagcggttgcccgag
cacgaactggaagctcacctgaccggcgtgctgacccgcgaggggcaggacttcgacccg
gcggcggtgcggcttatcgcgcggcgggccgcaggcagcgtgcgcgattccatgtcgctg
ctgggccaggtgctggcccttggcggcgagcgcctgaccgtggaaggcgcgcgcggcgtg
ctgggcctggccgggcaggaactgttcttcgaggtgatgcaggccctggcctcgcaggat
tgcgtggcggtgtccgccgtggtgcgcgacctgctggacaagggcgtggacatcgggttc
tttctgcgcgagctggcctctacctggcgcaacctgttcatgctgcgtcaggcgggcgag
gccgccctgcccgcgctggacctgccggaagaagaagcccgccagtggctggaatgggcg
ccgaagttcgagatcacgcacattcacgcctgctggcagatgaccctggaaggccagcgc
cgcgtgctgaccagcctagaaccggccatggcgctggaacttctgctgctgaacctggcc
atgctgccgcgccttgtctcgctggagcagctgtcgcgcggcggcggggctggccccgct
ggcggacgcggcgtgcccggcggcgttggtggagcgggtggcgctggcggcggacagccc
ggcggaggggcggggggccacggttccatgccgccccggcagggcgggtatggtgcgcaa
tccggccagtctgcccaggcgaaccaattcggccaggcgagccagctcggccagcccggc
gaatcgttcccgcaggcccagcccccgcagggccggtatcccggtccgggtcaggcccgg
ccccaggccgcgtcgtcggtatcgtccatgacctcggcagcgggtgcgtccggcgtgccc
ggcgtgccgggcatgcagcccgcgggtggctttccccgcccggagcggcccgctccggca
gcggcccctgctgcttcgggcggaggggcggacacctcgttgccatgggatgacgtcccg
catcccgcgcccggcgcgggcgctgcccccggtggccccgccgtggcgggtgtcgccgag
gcggacgccacgtctggcatgtcgggcgcatccgcattcacccctcagggcgatgccaca
tgggacggcttcgtgcgctactgcgcggaacgcagcaacggcggcaacggcctgtccgtg
ctgggccaggcgcgtggccgcatggacggcgcccgtctgatcgtggagacgcgcttccgc
acccagtacgagcacctctgttccaccggcaatcaggccgcccttgcagagtatgcccgc
gcctacttcggcgccgggaccacggtggaggtgcagccccccaccacccgcatcaagacc
ccctcggagctgcgcgccgaggccgaacggcatcccgccgtgggcctgctgcgcgagcag
ttcggggccaccatgctgtcctgccggcccctgtccgacagccagcttcaatag

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