Entry |
|
Symbol |
dnaX
|
Name |
(GenBank) DNA polymerase III subunit gamma/tau
|
KO |
|
Organism |
clih Nitratidesulfovibrio liaohensis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:clih00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPS_002635 (dnaX)
03430 Mismatch repair
KPS_002635 (dnaX)
03440 Homologous recombination
KPS_002635 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:clih03032]
KPS_002635 (dnaX)
03400 DNA repair and recombination proteins [BR:clih03400]
KPS_002635 (dnaX)
Enzymes [BR:clih01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPS_002635 (dnaX)
DNA replication proteins [BR:clih03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPS_002635 (dnaX)
DNA repair and recombination proteins [BR:clih03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPS_002635 (dnaX)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3075197..3077230
|
AA seq |
677 aa
MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK
ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY
KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE
HELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGERLTVEGARGV
LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE
AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLNLA
MLPRLVSLEQLSRGGGAGPAGGRGVPGGVGGAGGAGGGQPGGGAGGHGSMPPRQGGYGAQ
SGQSAQANQFGQASQLGQPGESFPQAQPPQGRYPGPGQARPQAASSVSSMTSAAGASGVP
GVPGMQPAGGFPRPERPAPAAAPAASGGGADTSLPWDDVPHPAPGAGAAPGGPAVAGVAE
ADATSGMSGASAFTPQGDATWDGFVRYCAERSNGGNGLSVLGQARGRMDGARLIVETRFR
TQYEHLCSTGNQAALAEYARAYFGAGTTVEVQPPTTRIKTPSELRAEAERHPAVGLLREQ
FGATMLSCRPLSDSQLQ |
NT seq |
2034 nt +upstreamnt +downstreamnt
atgagcaacgcccccctcaccgccagataccgcccgcagaccttcgccgaggtggccggg
caggagacggtaaaggccatcctttcccgcgccgcggcggaagaccgcgtggccccggcc
tacctgttcagcggcacgcgcggggtgggcaagaccaccatcgcccgcatcctggccaag
gcgctgaactgcgaaaaggcccccaccggagagccgtgcaacacctgcgagcagtgccgc
aaggtggtcatgggcaaccacgtggacgtggtggaaatcgacggcgcgtccaaccggggc
atcgaggacgcccgccgcctgcgcgaggccatcggctacgcgcccatggaaggccgctac
aaggtcttcatcatcgacgaagcccacatgctgacgcgcgaggcgttcaatgccctgctg
aaaacgctggaggaacccccgccgcgcgtcaccttcgtgctggccaccacagagccgcac
aaatttcccgtgaccatcatcagccgctgccagcacttcaccttcaagcggttgcccgag
cacgaactggaagctcacctgaccggcgtgctgacccgcgaggggcaggacttcgacccg
gcggcggtgcggcttatcgcgcggcgggccgcaggcagcgtgcgcgattccatgtcgctg
ctgggccaggtgctggcccttggcggcgagcgcctgaccgtggaaggcgcgcgcggcgtg
ctgggcctggccgggcaggaactgttcttcgaggtgatgcaggccctggcctcgcaggat
tgcgtggcggtgtccgccgtggtgcgcgacctgctggacaagggcgtggacatcgggttc
tttctgcgcgagctggcctctacctggcgcaacctgttcatgctgcgtcaggcgggcgag
gccgccctgcccgcgctggacctgccggaagaagaagcccgccagtggctggaatgggcg
ccgaagttcgagatcacgcacattcacgcctgctggcagatgaccctggaaggccagcgc
cgcgtgctgaccagcctagaaccggccatggcgctggaacttctgctgctgaacctggcc
atgctgccgcgccttgtctcgctggagcagctgtcgcgcggcggcggggctggccccgct
ggcggacgcggcgtgcccggcggcgttggtggagcgggtggcgctggcggcggacagccc
ggcggaggggcggggggccacggttccatgccgccccggcagggcgggtatggtgcgcaa
tccggccagtctgcccaggcgaaccaattcggccaggcgagccagctcggccagcccggc
gaatcgttcccgcaggcccagcccccgcagggccggtatcccggtccgggtcaggcccgg
ccccaggccgcgtcgtcggtatcgtccatgacctcggcagcgggtgcgtccggcgtgccc
ggcgtgccgggcatgcagcccgcgggtggctttccccgcccggagcggcccgctccggca
gcggcccctgctgcttcgggcggaggggcggacacctcgttgccatgggatgacgtcccg
catcccgcgcccggcgcgggcgctgcccccggtggccccgccgtggcgggtgtcgccgag
gcggacgccacgtctggcatgtcgggcgcatccgcattcacccctcagggcgatgccaca
tgggacggcttcgtgcgctactgcgcggaacgcagcaacggcggcaacggcctgtccgtg
ctgggccaggcgcgtggccgcatggacggcgcccgtctgatcgtggagacgcgcttccgc
acccagtacgagcacctctgttccaccggcaatcaggccgcccttgcagagtatgcccgc
gcctacttcggcgccgggaccacggtggaggtgcagccccccaccacccgcatcaagacc
ccctcggagctgcgcgccgaggccgaacggcatcccgccgtgggcctgctgcgcgagcag
ttcggggccaccatgctgtcctgccggcccctgtccgacagccagcttcaatag |