Nitratidesulfovibrio liaohensis: KPS_002924
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Entry
KPS_002924 CDS
T09362
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clih
Nitratidesulfovibrio liaohensis
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clih03016
]
KPS_002924 (truB)
Enzymes [BR:
clih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KPS_002924 (truB)
Transfer RNA biogenesis [BR:
clih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KPS_002924 (truB)
Prokaryotic type
KPS_002924 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WMW64857
LinkDB
All DBs
Position
complement(3423371..3424297)
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AA seq
308 aa
AA seq
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MAVLPAQQHGLLVLNKPRGPTSAQCIARVKRLGQKKIGHAGTLDPMARGVLLVLLGHATK
ISGHLMADGEKVYLGTLRLGTTTDTWDAEGSVTATAPYDHVTPDDIRREVENWLGSTEQE
VPPYSAAKHQGQPLYKLSRAGRETPVKTKTVEISRAQVVSCDLPSATFRVTCSSGTYIRS
LAHSLGMRLGCGAMLTELTREYSHPFGIDEAHELDAVLAEPERLPERVIPVTRALPHWPK
LRISAAQEAGVRNGMIVPYLPEAMAELPFAEGLKAIMLAPDDTPVALAETRIVNAQPVWT
VLRGLWSQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcctgccagcgcagcagcatggccttctggtgctgaacaagccccgggggccc
acctcggcccagtgcatcgccagggtgaaacggcttggccagaaaaagatcgggcacgcg
ggcaccctcgaccccatggcgaggggggtgctccttgtgctgttggggcatgcgacaaag
atttccggccacctgatggccgacggcgaaaaggtgtatcttggcacccttcgccttggc
accaccaccgatacgtgggacgcggaaggcagcgtgacggccaccgccccgtacgaccac
gtgaccccggacgacatccggcgcgaggtggaaaactggctgggcagcaccgaacaggag
gtgccgccctactccgccgccaagcatcaggggcagcccttgtacaagctgtcccgtgcc
gggcgcgagacgccggtaaagacgaagaccgtcgaaatttcgcgggcacaggtcgtatcg
tgcgacctgccgtccgcgaccttccgggtaacgtgcagttccggcacctacatacggtcc
ctggcccacagcttggggatgcgtttagggtgcggcgccatgcttacggaactgacccgg
gagtacagtcacccgttcggtattgacgaggcgcacgagcttgatgccgtgctggccgag
cccgagcggttgccggagcgggtcatacccgtcacgcgtgccctgcctcactggcccaag
ctgcgcatcagcgcggcgcaggaggcgggggtgcgcaacggaatgatcgtgccgtacctt
cccgaagccatggcggaactgccattcgcggaaggactgaaggccatcatgctcgctccg
gacgacacgcccgtggccctggccgaaacgcgcatcgtgaacgcgcagccggtctggacc
gtgcttcggggactgtggagtcaataa
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