Corynebacterium lizhenjunii: G7Y31_00415
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Entry
G7Y31_00415 CDS
T07490
Name
(Genbank) ATP-dependent RNA helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cliz
Corynebacterium lizhenjunii
Brite
KEGG Orthology (KO) [BR:
cliz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cliz03019
]
G7Y31_00415
Enzymes [BR:
cliz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G7Y31_00415
Messenger RNA biogenesis [BR:
cliz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G7Y31_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_11
AAA_16
Helicase_RecD
ParA
ResIII
AAA_19
AAA_22
LpxD
Motif
Other DBs
NCBI-ProteinID:
QPK79239
UniProt:
A0A7T0KFQ4
LinkDB
All DBs
Position
complement(85218..87698)
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AA seq
826 aa
AA seq
DB search
MSDSQPCASQPCASQPFDLRRIGKGLPVAETIATLPDTGHVVVQAPPGTGKTTLVPPAVA
NQVGDAGKVLVTVPRRVAVRAAAARLRALAGPDGAVSASKEAIGYAIRGESRPGSRIEFV
TPGVLLRRLISDPALNGVAAVVLDEVHERQLDTDLALAMCLELAVLREDFRVIAMSATVD
AQRFSQLLDAPVHTTQAPIHPLDIRYHPLPGRAQGSREFYTEVAREAAQLHAQQPGSTLV
FVPGVREVAAVCDSLPQLTPATPVYPLHGQLSSAEQDAALNPAADGIVVATAIAESSVTV
PGVRAVVDAGLSRTPRRDARRGMSGLVTVSTSASSAQQRAGRAGRQGPGVVVRCYSQEEF
ARFAAHAAPEITSADLTQAALFMECWGAGPDFPLPDAPPPAALDDAHRTLTALGATAAAG
ADSAAVERARDRARQLALMPTDPRLGAALLKHGAQAAATVAALGQSPRGDITRARAPRRE
VERLARLVRDRGPVDPGAVVAAAFPEQVARLVQPVSGGAGAKQVGAGRTGGAGGARGTEY
LLAGGTRARLLDAAGLEGAQWLAIAEVSLAQSGVAVIRAAARITEAAALEAIGVSDTTRA
FLDGGKVRAVRTTAAGAIILKETPVQPTPEQAAAALETAGLEIFTFSTRARNLLDRLRHL
RQAYGEPWPDPHADLSWAAPEFQAVAEGASASEVDMYAALQRALPWPEAARLEELVPETL
AVPSGRKVPIDWSGQRPAVAVKLQECFGLAQSPQLCGQRVQFQLLSPAGRPLALTDDLAS
FWAGPYAAVRAEMRGRYPKHPWPQDPWSAPPTAKTTAAMKGKRSSQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattcccagccgtgtgcttcccagccgtgtgcttcccagccgtttgacctccgg
cgcatcggcaagggtctccccgtcgccgagaccattgccaccctgccagataccggccac
gtggtagtccaagccccgccgggcaccggcaagaccaccctggtgccgccggcggtggct
aaccaggtcggcgatgccggcaaagtactggtcaccgtaccccgccgcgtggcggtgcgt
gcggcggcagcacgcctgcgcgccctcgccggtccagacggggcggtatcggcaagcaaa
gaagctatcggctacgccatccgcggcgagtcccgtccgggcagccgcatagagttcgtg
accccgggagtgctgttgcgcaggctcattagcgaccctgccctaaacggcgtggctgcg
gtggttctagacgaggtccacgagcgccagctcgacaccgacctggcgctggccatgtgc
ctggagttggcggtgctgcgtgaggacttccgggtcatcgctatgtccgccaccgtggac
gcacagcgtttctcccagctgctagacgccccggtgcacaccacgcaggcgcccattcac
ccgctagacattcgctaccatcccctgccgggccgcgcgcagggcagccgcgagttctac
accgaggtggcgcgcgaggccgcgcagctacacgcgcagcaaccaggctcaacgctggta
tttgtccccggggtgcgcgaagtcgcggcggtgtgcgactctctaccgcagctgaccccg
gccacgccggtgtaccccctgcacgggcagctcagttctgcggagcaagacgccgcgctc
aacccggcggcagacggcattgtggtggctacggccatcgcggagtcttccgtgacggtg
ccaggcgtgcgcgcggtggtggatgctggtctgtcccgcacgccgcgccgcgatgcccgc
cgcggtatgtctgggctggtcacggtctctacttccgcgtcgagtgcccagcagcgggcg
ggccgcgccggccgccagggccccggggtggtggtgcgttgctattcgcaggaggagttt
gcgcgttttgcggctcatgcggcgccggagattacctcggcggacctgacgcaggcggca
ttgttcatggaatgctggggtgccggccccgatttcccgttgcccgatgccccgcctccc
gccgcgcttgacgatgcccaccgcaccctcaccgccctcggcgccaccgctgcagccggt
gcggactccgctgctgtcgaacgcgcgcgggaccgcgcgcggcagcttgcgctcatgccc
acggatccgcgcctgggcgctgcgctgctgaaacacggcgcgcaggcggcggctaccgtt
gcggcgttggggcagtccccacgtggggacatcactcgcgcgcgagcaccacggcgtgag
gttgagcggctagctcgcttagttcgcgaccgcgggccggtggatccgggtgcggtggtg
gctgcggcgttcccggagcaggtggcccgcctggtgcagccggtgtccggcggcgcgggc
gccaagcaagtgggcgccggacgcacgggcggtgcgggtggcgcccgcggcacggaatat
ctgctggccggcggcactcgcgcgcggctgctagacgccgccggcttagagggggcgcag
tggttggccatcgcggaggtttccctggcccagtccggggtggcggttattcgggcggcg
gcgcgcatcactgaggccgcagcccttgaagccattggggtcagcgacactacgcgggct
ttcctcgatggcggcaaagtacgggcggtgcgcaccacggccgccggggcgatcatcctg
aaagaaacccccgtccagcccacgccagagcaggcagccgcggcgctagagacggccggc
ctagagatttttaccttcagcacccgcgcccgcaacctattggacaggctgcggcacctg
cgccaagcctacggcgagccttggccagacccgcacgctgacctgagctgggcggcgccg
gagtttcaggcggtggcggagggggcatcggcaagcgaggtggacatgtacgccgccctg
cagcgggcactaccctggccggaggcggcgcgtttggaggaactggtcccggagacgctg
gcggtgccctcggggcggaaggtgcccatcgactggtccgggcagcgcccggcggtcgcg
gtgaagctgcaagagtgctttgggttggcgcagtcgccgcagttgtgcgggcagcgggtg
cagttccagctgctctctccagccgggcggccgctggcgctcacagatgatttggccagt
ttttgggccgggccctatgccgcagtgcgcgcggagatgcgcgggcgctaccccaaacac
ccctggccgcaagacccctggtccgccccgcccacggctaaaaccactgctgccatgaaa
ggtaaacgctcatcacaataa
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