Clostridium ljungdahlii: CLJU_c00170
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Entry
CLJU_c00170 CDS
T01276
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLJU_c00170 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clj01007
]
CLJU_c00170 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clj03016
]
CLJU_c00170 (serS)
Enzymes [BR:
clj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CLJU_c00170 (serS)
Amino acid related enzymes [BR:
clj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CLJU_c00170 (serS)
Transfer RNA biogenesis [BR:
clj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CLJU_c00170 (serS)
Prokaryotic type
CLJU_c00170 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Laminin_I
DUF883
Motif
Other DBs
NCBI-ProteinID:
ADK13127
UniProt:
D8GK09
LinkDB
All DBs
Position
20707..21987
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AA seq
426 aa
AA seq
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MLDLKRIRNNPEEVKKQLSNRGEDFDPATIDEVIALDEKRRKILVEVEALKNKRNQDSAQ
IAKMKRNGENADDLVAEMKHVSDNIKQYDTELSELNGKIEYIMLRIPNIPNPAVPEGKSD
EDNVEIRKWSEPTKFDFKPKAHWDIGTDLDILDFERGGKVSGSRFTFYKGLGAKLERAII
TYYLDFHTEKHGYTEILPPYMVNRTSMTGTGQLPKFEEDAFRISNNDYFLIPTAEVPVTN
FHRDEVLKGENLPLKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVEMVKFTKPEESYDE
LEKLTNDAEDVLKGLKIPYRVVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNFED
FQARRANIKYKETPKDKPRYVHTLNGSGVAIGRTVAAILENYQQEDGSVIIPEILRPYMG
GKEVIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaataagaaacaatccagaggaagtaaaaaaacaactttcaaat
agaggagaagatttcgatccagcgactatcgatgaagtaatagctttagatgagaagaga
agaaaaatcctagttgaagtagaagctttaaagaataaaagaaatcaagattcagctcag
atagctaaaatgaaaagaaatggtgaaaatgcagatgatttagttgctgagatgaagcat
gtatcagataacataaaacagtatgatactgaattatcagaattaaatggaaagatagag
tacataatgcttaggatacctaatattcctaatcctgcagttccagaaggaaaatcagat
gaagataatgtagaaattagaaaatggtcagagcctactaagtttgactttaaacctaaa
gctcattgggatataggtacagatcttgatatacttgactttgaaagaggtggaaaggta
tcaggttctagatttacattttacaaggggttaggagctaaacttgaaagagctataata
acttattatttggattttcatacagaaaagcatggatatacagaaatattacccccttat
atggtaaataggactagtatgactggtacaggtcagcttcctaaatttgaagaggatgct
tttagaatatcaaataatgattactttttaattccaactgcagaagtaccagtaactaat
tttcatagagatgaggttttaaaaggagaaaatttgccattgaaatatgttgcatatagt
gcatgctttagagcagaagcaggatcagcaggaagagatacaagaggaataataagacaa
catcaatttaataaagttgaaatggttaaattcacaaaacctgaagaatcttatgatgag
cttgaaaagcttactaatgatgcagaagatgtacttaaaggactgaaaattccatataga
gtagttagaatatgtaagggagacttgggttttactgcagcacttaagtatgatatagag
gtttggatgccaagttacaatagatatgtagaaatatcaagctgtagtaattttgaggat
ttccaggcaagacgtgctaatataaaatataaggaaactccaaaagacaaaccaaggtat
gtacatactttaaatggatcaggagttgctataggtagaacagttgcagctatcttagaa
aactatcagcaagaagatggaagtgttataattcctgaaatattaagaccatatatgggt
ggaaaagaagtaataaaataa
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