Clostridium ljungdahlii: CLJU_c01520
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Entry
CLJU_c01520 CDS
T01276
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJU_c01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clj03019
]
CLJU_c01520
Enzymes [BR:
clj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLJU_c01520
Messenger RNA biogenesis [BR:
clj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLJU_c01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
DUF2555
tRNA_NucTran2_2
RFC1
Motif
Other DBs
NCBI-ProteinID:
ADK13242
UniProt:
D8GKQ9
LinkDB
All DBs
Position
152756..154156
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AA seq
466 aa
AA seq
DB search
MDYVKDFIKSTREVISKVGGEVYLVGGYIRDRLISITAQPKDIDFIFNGNIEKFMEELEN
RQYKFFPIKQEIGIYRCMLGNNSIDISLMEGDSIEEDLKKRDFTMNAIAIKLSGDKVKVI
DPFYGRRSIDNRIIKSVTDMSLENDPIRILRGIRFCISYGMHFNLDTEKCIEKLCYKIMD
MPMERVFKEFMLILERDDYGKAFEVLDNYGILKNIIPYIEELKTIGKCAYHIEDVFTHMN
LTYCVFKDILNGKVSVKGLNLHVFQDKIGDFKLREYMSLACFLHDIGKYEAYRKDGDKVS
FWGHEMKGAAIARNFCRNMKFPKKAESYIENIVEGHMYPLKIFKQNSKDKKNDFYKFFSK
YDGYIIEILTAAYCDNYATRMLLDVENEKVRFKMFIEDMLKEYELYCSINENKILNGNDV
IQILNISGPEVKNALEDVIRLRYLGKIQTREEALNYLRVKINNNYI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttggattatgtgaaagactttattaaaagcacaagagaagtaataagtaaagtaggagga
gaagtttatttagttggtgggtatataagagatagattaattagtataacagctcaacca
aaggatatagattttatatttaacggaaatattgaaaaatttatggaggaactcgaaaat
agacaatataaatttttccctataaagcaggaaataggtatatatagatgtatgctagga
aataattcgatagatatatctctcatggagggggattctattgaggaggatttgaagaaa
agagattttactatgaacgctatagctataaaacttagtggagataaagttaaagttatt
gatcccttttatggaagaagatctattgataatagaataattaaaagtgtaacggatatg
agcttagaaaatgatcccatcaggatacttagaggtattagattttgtatatcttatgga
atgcattttaatttagatacggaaaaatgcattgaaaaattatgttacaaaataatggat
atgcctatggaaagagtctttaaagaatttatgcttatattggaaagggatgattatgga
aaggcttttgaagttttagataactatggaatactaaaaaatattataccttatatagaa
gaattaaaaactataggaaaatgtgcatatcatatagaagacgtatttactcatatgaat
ttaacttattgtgtatttaaggatatcttaaatggtaaggtaagtgttaagggattaaat
ttacatgtgtttcaagataaaataggtgactttaagttgagagagtatatgtctttagct
tgctttttgcatgatattggtaaatatgaggcttatagaaaggacggagacaaagtaagt
ttttggggacatgaaatgaaaggagctgctatagctaggaatttctgtaggaacatgaaa
ttcccaaaaaaagcagaaagctatatagagaatatagtagagggccatatgtatccgcta
aagatttttaaacaaaattctaaagataagaagaatgatttttataagtttttttcaaaa
tatgatggatatataatagaaatactaactgctgcatattgtgataactatgctacaaga
atgcttttggatgttgaaaatgagaaagttagatttaaaatgtttattgaagatatgcta
aaagagtatgaattatactgcagtataaacgagaataagattttaaatggaaatgatgtt
attcagattttaaatatatcagggcctgaggtaaaaaatgctcttgaagatgtgataaga
cttagatatttaggaaaaatacaaactagagaagaagcattaaattatttaagagttaag
ataaataacaattatatttaa
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