Clostridium ljungdahlii: CLJU_c03270
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Entry
CLJU_c03270 CDS
T01276
Name
(GenBank) rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
clj
Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clj03009
]
CLJU_c03270
Enzymes [BR:
clj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CLJU_c03270
Ribosome biogenesis [BR:
clj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLJU_c03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Cons_hypoth95
Methyltransf_25
Methyltransf_15
MTS
PrmA
UPF0020
Methyltransf_11
TRM5-TYW2_MTfase
N6_N4_Mtase
Ubie_methyltran
PCMT
Methyltransf_12
Methyltransf_4
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADK13409
UniProt:
D8GLL3
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All DBs
Position
339636..341066
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AA seq
476 aa
AA seq
DB search
MSEKIEKNKEYIIEIDGMGYQGEGVGKVDGFTIFIQGAIQGEKVKVKVIKVNKNFAFGKL
LEVLEPSPYRANPLCSIYKRCGGCQLQHMSYEGQLDFKKKRVKDCLERIGKFEVEEQDRI
FKDNVLEKSSEDTSVKLYNTLGMTNPYRYRNKVQLPVGKCNQKINIGFYAKASHEIIDME
SCLIQDETSDKIVKFMRDWIEKYNIEPYDEKTGRGTIKHIMTRKGFATGEIMLVIVTFTE
NLPHKKELVELMCKNISGVKSIVHNINNNKTNVILGKKCVNLWGQDTIRDAIGNFKFNIS
PLSFFQVNPIQTEVLYSKALEYAGLSGNEVVFDAYCGTGTISLFLSQKSKKVYGVEIIDE
AIKNARINAEQNGVNNVEFITGKSEVVIPELISKGIKADVVVVDPPRKGCDMGLLKAIAD
MEPRTVVYVSCDPATLARDLAVLRELGYMTKEVQPVDMFAQTAHVETVVLMSRKEK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaatagaaaaaaataaagaatatataattgaaatagatggcatgggatac
cagggagagggagttggaaaggtagacgggtttacaatttttatacagggagctattcag
ggagaaaaggtaaaggtaaaagtcataaaggtaaataaaaattttgcttttggaaaattg
ctggaggtacttgaaccgtctccttatagggcaaatcctctctgtagtatatataaaaga
tgcggtggatgtcagcttcagcatatgtcctatgaagggcaacttgatttcaaaaaaaag
agggtaaaagattgcttagagagaataggaaaatttgaagtagaggaacaggatagaata
tttaaagataatgttttagagaaaagcagtgaagatacttcagtaaaattgtataacact
ctaggtatgacaaatccctatagatatagaaataaagtacaattgccagtaggtaaatgt
aatcaaaaaataaatataggattttatgcaaaggcaagtcatgaaataatagatatggaa
agctgcctcattcaagacgaaacttcagataaaatagtaaaatttatgagagattggatt
gaaaagtataatatagaaccctatgatgaaaaaacaggcagaggtactataaaacatata
atgactagaaaaggatttgctacaggtgaaattatgctggtaattgtaacttttactgaa
aacttgcctcataaaaaagaacttgtagaacttatgtgtaagaacatatctggagtaaag
agtatagtacataatataaataataataaaactaatgtgatattgggtaaaaaatgtgta
aatctatggggacaggatactataagggatgctataggtaattttaaatttaatatatcc
cctctttcattttttcaggtaaatcctattcaaacggaagtgctttacagtaaagcattg
gaatatgcaggcttaagtgggaatgaagttgtatttgatgcttattgtggtacgggaact
atatctttatttttatcccagaagtcaaagaaagtatatggtgtggaaataatcgatgaa
gccataaaaaatgcaaggataaatgcggagcaaaatggggtaaataacgtagagtttata
acgggaaagtctgaggtagtgataccagagctcataagcaaaggaataaaggctgatgtg
gtagtggttgatcccccaagaaagggatgtgatatggggctccttaaggcaattgcagat
atggaaccaaggactgtagtttatgtgtcctgtgatcctgcaacccttgccagggattta
gcagtgttgagagagctcggatatatgactaaagaagtacagcctgtggatatgtttgca
cagactgctcacgtggagacggtagtattgatgtcacgaaaagaaaaataa
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