Clostridium ljungdahlii: CLJU_c05550
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Entry
CLJU_c05550 CDS
T01276
Symbol
rfbB2
Name
(GenBank) dTDP glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj00521
Streptomycin biosynthesis
clj00523
Polyketide sugar unit biosynthesis
clj00525
Acarbose and validamycin biosynthesis
clj00541
Biosynthesis of various nucleotide sugars
clj01055
Biosynthesis of vancomycin group antibiotics
clj01100
Metabolic pathways
clj01110
Biosynthesis of secondary metabolites
clj01250
Biosynthesis of nucleotide sugars
Module
clj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLJU_c05550 (rfbB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLJU_c05550 (rfbB2)
01055 Biosynthesis of vancomycin group antibiotics
CLJU_c05550 (rfbB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLJU_c05550 (rfbB2)
00525 Acarbose and validamycin biosynthesis
CLJU_c05550 (rfbB2)
Enzymes [BR:
clj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLJU_c05550 (rfbB2)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
Sacchrp_dh_NADP
KR
NmrA
NifZ
CBD_PlyG
Statherin
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ADK13637
UniProt:
D8GN13
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All DBs
Position
602418..603473
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AA seq
351 aa
AA seq
DB search
MKTYLVTGGAGFIGSNFIHYMLKKYLNIKIINYDKLTYAGNLENLKFISKNPNYIFVQGD
ICDREKLQQLFEKYDIDYVINFAAESHVDRSIRDPEVFVKTNVLGTVALLDTAKNAWTLE
GEFKQGKKYLQVSTDEVYGSLGKEGYFTEKTPLDSHSPYSSSKASADLMVKAYFDTYKMP
VNITRCSNNYGPYQFPEKLIPLVINNCANKRDIPVYGDGLNIRDWLYVEDHCKAIDMVIN
NGKLGEAYNIGGHNERTNIYIVKTIISYIHDNVDPYVDENLIKYVEDRKGHDRRYGIDPT
KIKDELGWYPETEFEDGIIKTIKWYLDNKDWMNNVTSGDYKKYYDRMYKNK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatatctggtaacaggaggagcaggctttattggctctaactttattcattac
atgttaaaaaaatacttaaatataaaaataataaactacgacaaactaacctatgcaggt
aaccttgaaaacttaaagtttatatctaaaaatcctaactacatcttcgtccagggagac
atatgtgacagagaaaaacttcaacagctatttgaaaaatatgatatagactatgtgata
aactttgcagcagaatctcatgtagacaggagcataagagatcctgaagtatttgtaaag
acaaatgttctgggcactgtggcacttttagatactgcaaaaaatgcatggactttagaa
ggtgaatttaaacagggcaaaaaatatcttcaagtttccacagatgaggtttatgggtca
cttgggaaagaaggatattttacggaaaaaactccactggattctcacagcccttattct
tcaagtaaagcgtctgctgatttgatggtaaaggcatattttgatacttataaaatgcct
gtaaatataacccgctgttcaaacaattatggtccctatcaatttcctgaaaaacttatt
ccacttgtcataaacaattgtgcaaataaaagagatattccagtatacggtgatggactt
aacataagagattggctttatgtagaagatcactgtaaagctatagacatggttatcaat
aatgggaaactaggagaggcttataacataggtgggcataatgagagaacaaacatctat
atagttaaaacaataatttcatatatacacgacaatgtagatccttatgtagatgaaaat
cttataaaatatgtcgaagaccgaaaaggacatgataggagatatggcattgatcctaca
aagatcaaagacgaacttggatggtatcctgaaacagaatttgaggatggcataataaaa
actataaagtggtacttagataataaagattggatgaataatgtgacttctggggattat
aagaagtactatgacagaatgtacaaaaacaaataa
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