Clostridium ljungdahlii: CLJU_c13180
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Entry
CLJU_c13180 CDS
T01276
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clj
Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clj03016
]
CLJU_c13180 (truB)
Enzymes [BR:
clj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLJU_c13180 (truB)
Transfer RNA biogenesis [BR:
clj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLJU_c13180 (truB)
Prokaryotic type
CLJU_c13180 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
FtsH_ext
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ADK14386
UniProt:
D8GS33
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All DBs
Position
1415814..1416695
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AA seq
293 aa
AA seq
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MIDGILNINKPVGMTSFDVVKKIRSISGNKKVGHTGTLDPIASGVLPICIGGATKFADYI
MKSHKIYLAELKLGVNTDTYDREGTIVGTSEVKLDEKSVRDTILSFQGEIEQLPPMYSAI
KINGKKLYDLARQGIEIERNKRKINIYSIEIINIELPYVVFQVKCSKGTYIRSLCHDIGE
KLNCGGIMWNLKRMATGNFNISNSILLEDLQKDIISKYIIPVDKALEEYPKVIVQDKYLK
HVLNGITIKDKEFIDKIQEGKIYRVYIHENKFIGIGSRGTFGFKMVKLFVRGN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattgatggaattttaaacataaataaacctgttggaatgacttcctttgatgtagtt
aagaaaattagatcaatatcaggtaataaaaaagttggccacacaggtactcttgaccct
attgcatcaggagtacttcctatttgtataggtggtgccacaaaatttgcagattatata
atgaaaagccataaaatttatctagctgagttgaagcttggagttaatacggatacctat
gatagggaaggaactatagtaggtacttcagaagttaagcttgatgaaaaaagtgtaaga
gatacaattttaagttttcagggggaaatagaacaacttccacctatgtattcagcaatt
aagattaatggaaaaaagctttatgatttagcaagacaaggtatagaaatagagagaaat
aaaagaaaaatcaacatatattctatagaaattattaatatagaattaccttatgtagtg
tttcaagttaagtgttctaaaggaacttatataagaagtttatgccatgatattggcgaa
aaattaaattgtggtggcataatgtggaacctaaagagaatggctacgggaaattttaat
atttcaaattctattttactagaggacctgcagaaagatatcatatcaaaatacattatt
ccagtagataaagcactagaagaatatcctaaggttatagttcaggataaatatttaaaa
cacgttttaaatggtatcacaataaaagacaaagagtttatagataaaattcaagaaggt
aaaatctatagggtatatatacatgaaaataaatttataggtattggaagtaggggaact
tttggatttaagatggtaaaattattcgttagaggtaactag
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