Clostridium ljungdahlii: CLJU_c13210
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Entry
CLJU_c13210 CDS
T01276
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJU_c13210 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clj03019
]
CLJU_c13210 (pnp)
03016 Transfer RNA biogenesis [BR:
clj03016
]
CLJU_c13210 (pnp)
Enzymes [BR:
clj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CLJU_c13210 (pnp)
Messenger RNA biogenesis [BR:
clj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLJU_c13210 (pnp)
Transfer RNA biogenesis [BR:
clj03016
]
Prokaryotic type
tRNA degradation factors
CLJU_c13210 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
PCB_OB
SKA2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADK14389
UniProt:
D8GS36
LinkDB
All DBs
Position
1418078..1420231
Genome browser
AA seq
717 aa
AA seq
DB search
MFFMSEIIQTTVAGRTLKVDYGKIGKLSNCAFFISYGDTVVLINANASDKPREGVDFFPL
SIEYEERLYSVGKIPGGFIKREGKPSEKAILHARAIDRPLRPLFPKGYRNDVQVVCTVVS
VDQDNAPDILAINGASLALCMSSIPFTTPVGAVSVGLVDGKFVINPGLEERSKSSLNLTV
CATDERVMMVEAGGDEIPEDTMYDAIMFGFEECKKIVAFQKETMNKYGKQKEEPELYKVE
ESIEEEVRKFAFQKIKDAMYIMDRDERNAALEDVDKELNEQFSEKYPDNGPDIAEVVYKI
KKEIVRNMMLNEHRRVDGRAFDEIRPISCEVGILPRTHGTGLFTRGLTQVMTVATLGSLG
DVQILDGVGSEESKRYIHHYNFPSYSTGETRPLRGPGRREIGHGALAEKALEPLIPSEDQ
FPYTIRLVSEVLSSNGSTSQASICGSTLALLDAGVPIKRPAAGIAMGLITSEDLSKEEIV
TDIQGIEDFFGDMDFKVGGTEKGITAIQFDTKIHGLSENCIRETLNRARTARLFILDKIH
KCIPEAREELSEYAPKTYTMSIPPDKIRDVIGAGGKVINKIIAETGVKIDIKEDGKIFVM
SEDSSSAKKALKIIEDLTREVKAGEIYLGKVTKTTNFGAFVEILPGKEGLVHISKLDFTR
VNKVEDIVSVGDKILVKVTDIDNQGRINLSRKDAIKDSEENSTKENNSKESNLKQNK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttttttatgagtgaaataattcaaactactgttgctggaagaactttgaaagttgat
tatggtaaaataggaaaactttctaattgtgctttttttataagttatggcgatacggta
gttttaatcaatgctaatgcttcagataaacctagagaaggagtggacttttttccttta
agcatagaatatgaggaaaggttgtattctgttggaaaaatacctggaggttttataaag
agggaaggaaagccttctgaaaaggctatattacatgccagggcaatagatagacctctt
agaccactgtttccgaaaggatacagaaatgatgttcaagtcgtttgtacggtagtatct
gtagatcaagataatgcgccagatatattagctataaatggagcatcactggctctttgt
atgtcaagcattccttttactactccagtaggagcagtatctgtaggacttgtagatggt
aagttcgtaataaatcctggcttagaggaaagaagtaaaagcagtttaaatctcacagta
tgtgctacggatgaaagagttatgatggtagaggctggtggagatgaaataccagaagat
accatgtatgatgctataatgtttggatttgaagaatgtaagaagatagttgcatttcaa
aaagaaactatgaataaatatggaaagcaaaaggaagaaccagaactctataaagtagag
gaatccatagaagaagaagttagaaaatttgcatttcaaaaaataaaagatgccatgtac
ataatggatagagacgagagaaatgcagctttagaagatgtggataaagaattaaatgag
caattttcagagaagtatccagataatggaccagatatagcagaggtagtatataagatt
aagaaagaaatagtaagaaatatgatgttaaacgaacacaggagagttgatggaagggct
tttgatgaaataaggccaataagttgtgaggttggtattcttccaagaactcatggaact
ggattgtttacaagaggattgacccaggtaatgactgttgccacccttggttctttaggt
gatgtacaaatacttgatggagtaggttctgaagaatcaaagagatatatacatcattat
aatttcccatcgtacagtacaggcgagactagacctttaagaggacctggaagaagagaa
ataggacacggtgcgttagctgagaaagctttagaaccacttataccaagtgaagatcaa
ttcccatatactataagacttgtatcagaggtattgagttctaatggatctacttcccag
gcaagtatatgtggaagtacactagcacttttagatgcaggagttcctataaagagacca
gcagctggaatagccatgggacttataactagtgaagatttgtctaaggaagaaatagtt
actgacatacaaggaattgaggatttctttggagacatggattttaaagttggtggaaca
gaaaaaggtattactgccattcaatttgatacaaagattcatggattatctgaaaactgt
ataagagaaactcttaatagagcaaggacagctaggttatttatattggataaaattcac
aagtgtattccagaagctagagaagaattatcagagtatgccccaaagacatatacaatg
tccatacctccagataaaataagagatgtaataggagctggcggaaaagttatcaataag
ataatagcagaaactggtgtaaagatagacataaaggaagatggaaaaatatttgtaatg
tcagaggacagtagtagtgctaagaaagcattaaagattatagaggatcttactagagaa
gtaaaagcaggagaaatatacttaggtaaagttactaaaacaactaattttggtgctttt
gtagaaatacttccaggaaaagaaggattagtacacatatcgaagttagactttacaaga
gttaataaggtagaagatatagtttcagtaggagataagatattagtaaaggtaacagat
atagataatcagggtagaataaatctctccagaaaagatgcaataaaagattctgaggaa
aatagcactaaagaaaataattccaaagaaagcaacttaaagcaaaataagtaa
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