Clostridium ljungdahlii: CLJU_c13260
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Entry
CLJU_c13260 CDS
T01276
Name
(GenBank) putative MiaB-like tRNA modifying enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clj
Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clj03009
]
CLJU_c13260
Enzymes [BR:
clj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLJU_c13260
Ribosome biogenesis [BR:
clj03009
]
Prokaryotic type
ribosomal protein modification factors
CLJU_c13260
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
ADK14394
UniProt:
D8GS41
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All DBs
Position
1425270..1426592
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AA seq
440 aa
AA seq
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MDKLRVGLISLGCDKNRLDSEVMLSNLNQEYSLVHDPKLADVIIINTCGFIESAKQESID
TILEMSQYKEKFNCKLIVVTGCLAQRYGKELMELLPEIDIMLGVNDYDKLNETIRKCIET
DNSRIYNCDYSDSNINEGKRILTTSTYTAYLRIAEGCDNHCTYCIIPKIRGKYRSRTIEN
IINECNDLANQGVKEIILIAQDTTRYGIDIYGKKMLPELIQKISKINEIEWIRLLYCYPE
ELTDEIINEISMNDKVCKYIDIPIQHISDSILKLMGRRGRKLDIIENIDKLRARAKGIAI
RTTIIVGFPGETEENFEELKDFVSTMKFDNLGVFKYSREEGTAAAEMKNQVPEEIKSARE
GELMVLQKQVMTSINKSKIGSTYKVIVEGKKGELWYGRSYEMAPDIDGVIYIKCKKTLKI
GTMVNVKITHILEYDLVGVV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtggataaactaagagttggactaataagtttaggctgtgacaaaaatagattggattct
gaagtaatgttaagtaatttaaatcaagaatacagtttagttcatgatcctaaattagcg
gatgtaataattataaatacatgtggatttatagaatcagctaaacaggaatccatagat
acaatacttgaaatgtcacagtataaagaaaaatttaattgcaaattaattgtagtaaca
ggatgcctggctcagaggtatggtaaggaacttatggagttattgccagaaatagatata
atgcttggagtaaatgattatgataagttaaatgaaactataaggaaatgtattgaaact
gacaacagtaggatttataattgtgattacagtgattctaatataaatgaaggaaaaaga
atacttactacttcaacatatactgcttatttgagaattgcagagggatgtgacaatcac
tgtacctactgtataattcctaaaattaggggaaagtatagaagtagaaccattgaaaac
ataataaatgaatgtaatgatttagctaatcaaggtgttaaggagataatacttattgca
caggatactacaagatatggaatagacatatatggtaaaaaaatgcttcctgaactcatt
caaaaaatatctaaaattaatgaaatagagtggataaggcttttgtattgctatcctgaa
gagttaacagatgaaatcataaatgaaatttcaatgaatgataaagtatgtaagtatata
gatatacctattcagcacataagtgattccatactgaagcttatgggaagaagaggaaga
aaattagacataatagaaaatatagataagcttagagctagagcaaaaggtattgcaatt
aggactacaataatagttggctttcctggagagacagaagaaaattttgaagaactaaag
gactttgtaagtactatgaaatttgataacttaggtgtatttaagtattccagagaggaa
ggaactgcagctgcagaaatgaaaaatcaggttcccgaggagattaagtctgcaagggaa
ggagaacttatggtacttcaaaagcaggtaatgacttccataaataaaagtaaaattggc
agcacttacaaagtaattgtggagggaaaaaagggagaactgtggtacggaagaagttat
gaaatggctccagatatagacggagttatatatataaagtgtaaaaaaactttaaaaata
ggtactatggttaacgtaaaaattactcatatccttgaatatgatttagtaggagttgta
tga
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