Clostridium ljungdahlii: CLJU_c14310
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Entry
CLJU_c14310 CDS
T01276
Name
(GenBank) predicted helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj03420
Nucleotide excision repair
clj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLJU_c14310
03430 Mismatch repair
CLJU_c14310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clj03400
]
CLJU_c14310
Enzymes [BR:
clj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLJU_c14310
DNA repair and recombination proteins [BR:
clj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLJU_c14310
MMR (mismatch excision repair)
Other MMR factors
CLJU_c14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PhoH
DEAD
Viral_helicase1
UvrD_C_2
SLFN-g3_helicase
ResIII
DUF2852
NPHP3_N
Cystatin
AAA_16
Intein_splicing
NACHT
FliG_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADK14499
UniProt:
D8GSS9
LinkDB
All DBs
Position
complement(1531032..1533266)
Genome browser
AA seq
744 aa
AA seq
DB search
MNNFEWKLENQWLQEVLKEARKQFNEKHAFKEKFRKDSIETQKQLWEDVGPLSIANGLEQ
VVDFMEFITTMKIQKKRHEFVRKLEEKYKKILLSPYFGRMDFLERGDEKTQKCYIGSFNL
INDNFDFLVYDWRAPISSMYYDYEIGKANYICPEGKIHGEIALKRQYKINNGKIEYMFDS
NLNIDDEILQGILSKSTDSKMKNIVTTIQREQNKIIRNEDYKNLIVQGPAGSGKTSIALH
RIAYILYKHRDKIASKNIIIFSPNEIFNEYISNVLPQLGEDNICQTTFKEYMQKVLESAF
KKEDYSEMMETILAAKEDPMYPKRIMSIKYKSSMQFIDILKKYVDYTEKEDRNFKDIIIR
DKLIISSKDLQELFFKDYIQLPLKRRLQKIRERILFLMEPYEKDWVKKAASELKESDSYI
DKIEIRNRSIAIVKNEMKDIYSKINKMTEFDLIDIYKKLFMKLECFSANCNTGYSEKEIA
EIKSYTLENLKAGKLNYEDQPPLLYLKGALEGIPKTSEIKYVIIDEAQDYTPLQYEIFYQ
LFKHANMTILGDLNQSINPFMNVGDYNNISHIFPKDNTCIINLTKSYRSTMEITKFSRRL
LGKEITDGCVERSGAEPLILGFSDEKAIKEKFLEDIKVHKEKGYKSIGIITRTVKEANEI
YNFLKEKVHVKAILKDDDEYVSDTLVIPAYLAKGLEFDVVLIYNAGDENYCCEEERLLLY
TACTRALHVLRIYYSGNCTPLLHD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaactttgaatggaaactggaaaatcaatggctgcaggaagtgctcaaagaagct
cgaaaacaatttaatgaaaaacatgcttttaaagaaaaatttagaaaggattctattgaa
acacaaaagcagctttgggaggatgtagggcctttatccatagctaatggattggagcag
gttgtagactttatggaattcatcacaactatgaagatacagaaaaaaagacatgaattt
gtgagaaaacttgaagaaaaatataaaaaaatacttttatccccctactttgggaggatg
gattttcttgaaagaggagatgagaaaactcaaaagtgttatattggaagctttaatctt
atcaatgacaattttgattttctagtatatgattggagagcacccatttccagcatgtac
tatgattatgaaatcgggaaagctaattatatatgccctgaaggaaaaattcatggtgaa
attgctttaaaaagacagtacaaaatcaataatggcaaaattgagtatatgtttgacagc
aatctaaatattgacgatgaaatacttcaaggtatcttgagcaaaagcactgatagtaag
atgaagaatatagtgacaactattcaaagagagcaaaataaaataattcgtaatgaggat
tataaaaatttgattgttcaggggcctgctggaagtggaaaaacttccattgctcttcat
agaattgcatacatcctatataagcatagagataaaatagcatcaaaaaatataataata
ttttctccaaatgaaatttttaatgagtatatttccaatgtattacctcagcttggcgaa
gacaatatatgtcaaactacatttaaagaatatatgcaaaaggtcttagaatctgctttt
aaaaaggaagattacagtgaaatgatggaaactattcttgcagctaaggaagatccaatg
tatccaaaaagaataatgagtataaaatataaatcttccatgcaatttatagatatatta
aaaaaatatgtagattatactgaaaaagaagatagaaattttaaagatattattataaga
gacaagttaataatctcctctaaggatttgcaggagctgttttttaaagattatatacag
cttccactaaaaaggagacttcaaaagataagagaaagaatattatttcttatggaacct
tatgaaaaagattgggttaaaaaagcagccagtgaacttaaggagtcagattcttatata
gataaaatagaaattaggaatcgtagtatagctattgtaaaaaatgaaatgaaggatata
tattctaaaatcaataaaatgacagagtttgatttaatagatatttataaaaagcttttt
atgaaattggaatgtttttctgcaaattgtaatactggatacagcgagaaagaaattgct
gaaataaaaagctatactttggaaaatttaaaggctgggaagcttaattatgaggatcaa
cctcctcttctatatcttaaaggagcactagaaggaattcctaaaacctcagaaatcaaa
tatgttattattgacgaagcacaagattatacaccattgcaatatgaaattttttatcaa
ctttttaagcatgctaatatgactatactaggcgaccttaatcaatccatcaatccattt
atgaatgtaggagattataacaacatctctcatatatttcctaaagataatacttgcata
ataaatttaaccaaaagttacaggtcaaccatggaaattactaagttctccagaaggcta
cttggcaaggagattactgatggatgtgtagaaagaagtggagctgaacctttaatcctt
ggtttttcagatgaaaaagctataaaagaaaaatttcttgaggatataaaagtccataag
gagaaaggttataaatccattggtattataacaaggactgtaaaagaagcaaatgaaata
tacaattttttaaaagaaaaggttcatgtcaaagctatcttgaaggatgatgacgaatat
gtaagtgataccttggtaatcccagcatatcttgctaaagggttagaatttgatgtagtg
cttatatataatgcaggagatgaaaattattgctgtgaggaggaaaggcttctgctttat
actgcttgtaccagagctcttcatgttttgcgcatatattattcaggcaactgtactcca
ttattgcatgattaa
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