Clostridium ljungdahlii: CLJU_c15050
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Entry
CLJU_c15050 CDS
T01276
Name
(GenBank) MutS related protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
clj
Clostridium ljungdahlii
Pathway
clj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLJU_c15050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clj03400
]
CLJU_c15050
DNA repair and recombination proteins [BR:
clj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CLJU_c15050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADK14569
UniProt:
D8GTC0
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Position
1630422..1632335
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AA seq
637 aa
AA seq
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MNTNTFDKLQYNDLKKIVKSYCVSGLGKKLIDKLKPSTNLKVIDKRLNETSEGRALLDTC
SYIPLEGIFNIDNIIDNVEKGMVLEPEDLTTLCNFLRGCRKIKNFMKDKEFYAPTLSSYG
NSITEFTFIEEEIELSIRGSLVDSNASKELRKIRRLIENTESKIQDKLEKFLKNSSNKKY
IQEFFISKRNGRYTIPIKAAYKNQVPGNIVETSSKGSTIFIEPNNISKSTEELTALKAEE
SIEEYKILSTLTALVFDNLREIKINMEVIEEYDMIFAKAKYSKAINGMKPKINDYGYINI
IKGKHPLLKGDVVPLDFKVGDDYRTLIITGPNAGGKTVVLKTVGILTLAVQSGFHISAAE
GTEISVFEKIFVDIGDDQSIENALSTFSSHIKNLADIIDNSNKSTLILCDEIGSGTEPNE
GAGLAIAILEEFYHKGCITVATTHYGEIKNFSEIHEDFQNAAMQFESETLEPLYKLVIGK
SGESNALWISKKMGIKNSVLEKAESYIKNKDYNFKLVKESKIKNRKVEEEFDEHKNYYYF
KIGDRVFLMDYEDFAIVYKEKDRFNNVTVLYKENFIEVNEKRIRLELKAEDLYPKDYDLN
TLFVSYKDRKLERDIIRGSKKALKKIQKEIKNQYHKE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaacacttttgataaattgcaatataatgacttaaagaaaatagtaaaatct
tattgtgtaagcggattaggaaaaaagttaatagataagcttaagccaagtacaaattta
aaggttatagataaaaggctgaatgaaaccagtgaaggaagagctttattagatacttgc
agttatatacctttagagggaatattcaatatagataatattatagataatgttgaaaaa
ggtatggtgctggagccagaagatttaactactctctgcaattttttaagagggtgcaga
aaaattaagaattttatgaaagataaagaattttatgctccaacattaagttcatatggt
aattcaattacagaatttacatttatagaagaagagattgaactttctataaggggaagc
ttggtggattctaacgctagcaaagaattaagaaaaataagaagacttatagaaaatacg
gaaagtaagatacaagataaattagaaaagtttttaaaaaatagtagtaataaaaaatat
atacaggaattttttataagcaaaagaaatggaaggtatactatacctataaaagctgca
tataagaatcaagttccaggcaatatagtagaaacttcttctaaaggttccactatattc
atagagccaaataatataagtaaaagtacagaagaattaacagcattaaaagctgaagaa
tcaatagaagaatataaaatactatctactttaacagcattagtatttgataatttaaga
gaaattaaaattaatatggaagttattgaagaatatgatatgatttttgctaaggcgaaa
tacagtaaagctattaatggaatgaagcctaaaattaatgattatggatatataaatatc
ataaagggaaaacatccattgttaaagggtgatgtagtacctttagattttaaggtaggt
gatgattatagaactttaataataacaggacctaatgcaggtggaaaaacagtagtatta
aaaacagtaggaattttaaccttagcagttcaatcaggatttcatatttcagctgcagaa
ggaacagaaatatctgtatttgaaaaaatatttgttgatattggagacgatcaaagtata
gaaaatgcactaagtactttttcttcccatataaaaaatttagcagatataattgacaat
agcaataaatctacacttatattgtgcgatgaaataggaagcggaacagaacctaatgaa
ggagcaggacttgctatagccatattagaggaattttatcataaaggatgtattacagta
gctactactcattatggtgaaataaagaatttttcagaaattcacgaagattttcaaaat
gcggctatgcaatttgaaagtgaaacattagaaccattgtataaattagttataggtaaa
tctggagagagcaatgcactttggatatctaaaaaaatgggtataaaaaactctgtactt
gagaaagcagaaagctatataaaaaataaagattataactttaaattagttaaagagagc
aaaattaaaaatagaaaagttgaagaagaatttgatgaacacaaaaactattactacttt
aaaataggagatagggtatttcttatggactatgaagattttgctattgtctataaagaa
aaggataggtttaacaatgttactgtattgtataaagaaaattttatagaagttaatgaa
aagagaatcaggctagaattaaaagcagaagatttgtatcctaaggactatgatttaaat
actctatttgtaagttataaagatagaaagttagaaagagacattataaggggctctaaa
aaggctttaaaaaagattcaaaaagaaataaaaaatcaatatcataaggaatga
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