Clostridium ljungdahlii: CLJU_c21320
Help
Entry
CLJU_c21320 CDS
T01276
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj00900
Terpenoid backbone biosynthesis
clj01100
Metabolic pathways
clj01110
Biosynthesis of secondary metabolites
clj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLJU_c21320
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLJU_c21320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
clj03011
]
CLJU_c21320
Enzymes [BR:
clj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CLJU_c21320
Ribosome [BR:
clj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLJU_c21320
Bacteria
CLJU_c21320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
CsrA
Motif
Other DBs
NCBI-ProteinID:
ADK15192
UniProt:
D8GJN1
LinkDB
All DBs
Position
complement(2320989..2322902)
Genome browser
AA seq
637 aa
AA seq
DB search
MNIILADKSGFCFGVKRAVDESLKVQKKFNKKIYTLGPLIHNSDVVNKLKEKGIYPIEID
NLDNLREDDVVIIRSHGVPEKIFFTLKNKKINIVNATCPYVLNIQRKVQEYYKLGYSILI
VGDKNHPEVIGINGWCENKALISKDGTNLEKLPSKLCIVSQTTEKQSNWEKVLSIVTKNC
KEFIAFNTICSATEFRQKAAADISKEVDMMVVIGGKNSSNTTKLYEICKDNCNNTIYVEN
SGEIPDDISNCNKIKTIGVTAGASTPDWIIKEAILKMSDDKNLELNEQLSYMDKNDTQII
LGEKIKGTVISVNQKEVFLNIGYKSEGVLPKREITKNESDNLEELIHCGDELYVKVIRRQ
NEDGYVVLSKIELERENAYKELKEANGNSQVLKVIVKEAVNGGLVANYKGARVFIPASHV
ELYHVDDLSQYVDKELDVTIIEFKEEKKGTRIVASRRDLLRMEREKMEEQTWNVLEKDTV
VDGEVRRLTDFGAFVDVQGVDGLLHVSELSWGRVGKPSDVLKIGDKIKVYILDIDREKKK
LSLSLKKLMEDPWINVDIKYPVGNVVLGKVVRFANFGAFVELEPGVDALVHISQISHKRI
DKPEDVLKIGQEIKAKILEVNKDSEKIALSIKEVDEI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttgaacattattttagcagacaaatccggattttgctttggagtaaaaagagctgtagac
gaatctttaaaggttcaaaaaaaatttaataaaaaaatatatactttaggtcctttgatt
cataatagtgatgtagtgaataaattaaaggaaaaaggtatatatcctatagaaatagat
aatctggataatctaagggaagatgatgtggttataatacgttctcatggtgttcccgaa
aaaatattttttactttaaaaaataaaaaaataaacatagtaaatgcaacttgcccatat
gttttaaatatacaaagaaaagtacaagaatattataaattagggtattctatattaata
gtaggagataaaaatcatcctgaagtaattggaataaatggatggtgtgaaaataaggct
ttaatatctaaagatggcaccaatttagaaaagttaccatcaaaattatgtatagtttct
caaactacagaaaaacaatctaactgggaaaaagtgcttagtatagtgactaaaaattgc
aaagaatttattgcttttaatactatatgcagtgccacagaatttcgtcagaaggcagca
gcagatatttctaaagaagtagatatgatggtagtaataggtggtaaaaatagctctaat
actactaaactttatgaaatatgtaaagataactgcaataatactatttatgttgaaaat
tcaggagaaatacctgatgatataagtaattgtaataaaattaaaactataggtgttaca
gcaggagcttcaacaccagattggataataaaggaggcaattttaaaaatgagtgatgac
aaaaatttagaactaaatgagcaactatcttatatggacaaaaatgatacccaaataata
ttaggtgaaaaaattaaaggtacagtaatatctgtaaatcaaaaagaggtttttttaaat
ataggatataaatcagaaggtgtacttccaaaacgtgaaataaccaaaaatgaaagcgac
aacttagaagaattaattcattgtggagatgaattatatgttaaagtaataagaagacaa
aacgaagatggatatgttgtattatctaagatagaattagaaagagaaaatgcttataaa
gaattaaaagaagctaatggaaatagtcaagtattaaaggttattgtaaaagaagctgta
aatggaggtcttgttgccaattacaaaggtgctagggtatttatacctgcttctcatgta
gaattatatcatgtagatgacctttcacaatatgtagataaagagcttgatgtaactata
attgaatttaaagaagaaaagaaaggtaccagaatagtagcttcaagaagagaccttttg
agaatggaaagagaaaagatggaggaacagacttggaatgtgcttgaaaaagatactgta
gtagatggcgaagtcagaagattaactgattttggcgcatttgttgatgtacaaggagtt
gacggacttctacatgtatctgaactttcttggggaagagttggaaagccaagtgatgtt
ttaaaaatcggagataagattaaagtttacatcttagatattgatagagaaaagaaaaaa
ttatccttatccttaaaaaagctcatggaagacccatggatcaatgtagacataaaatat
cctgttggaaatgtagttcttggtaaagtagttaggtttgcaaattttggtgcatttgtt
gaattagagccaggtgtagatgcattagttcatatatcacaaataagccataagagaata
gataaaccagaagatgtacttaaaataggtcaggaaataaaggctaagatccttgaagta
aataaagatagcgaaaaaatagctttaagtataaaagaagtagatgaaatctaa
DBGET
integrated database retrieval system
