Clostridium ljungdahlii: CLJU_c23970
Help
Entry
CLJU_c23970 CDS
T01276
Name
(GenBank) predicted sigma-54-interacting transcription regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
clj
Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clj03000
]
CLJU_c23970
Transcription factors [BR:
clj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CLJU_c23970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_PrkA
PAS_8
AAA_2
PAS
PAS_4
PAS_9
AAA
HTH_30
AAA_5
AAA_3
MCM
AAA_16
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ADK15455
UniProt:
D8GL96
LinkDB
All DBs
Position
complement(2646788..2648716)
Genome browser
AA seq
642 aa
AA seq
DB search
MEVVIIMGGIIVNTVTSKLDNEAVYKTDIELSHERCKKFGIDSRQVFSKKILYDNELQKK
FAANRNLILTAAPYMEQLINFVKGFNFFVLLTDGEGCILNALGDEKILSKAFSLKMVPGA
FMNEENIGTNSMSMVISTKMPVQVSGDDHFIRAYHKWTCSAAPIKDSKGRLIGVLNLTGY
AEFVHSHTLGMVIAASNAIEEMLKVKECNKIQNMNYKHIKNIFNSSPVSIITSDINGKIK
ICNKKAQDMFGIRGNKLEADKMEDIIENWNDIKTSIYLGQGTSKETNIVAVRNKTRYQLT
TSSIYNCEDDNIEVVYVFEEIKMAKKRNDGQAYYTFDKIIGQDESFMRIIEYAKKISDSK
STILIMGESGTGKEVFAQSIHNYSSRVDGPFIALNCGAIPKQLIESELFGYEEGAFTGAK
KGGNLGKFELADGGTIMLDEIGEMPLDMQTKLLRVVQEGVITKIGSSKSIPVDVRIVAVT
NRDLKKEVERGRFRKDLYYRLNVLPLYLPPLRERKKDIPLLIQYFIKSISQKLNKKQPVI
PGQYLQKMINYSWPGNIRELENVVELIINTESVPAGYFSEESCNNDVFVNINEDCLKLDY
VEREHLVKVLKKFKGNITHSAAALGIRRNTLYSKIKKYKIEM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttggaagttgttattataatgggggggattatagtgaatacagttacttctaaattggat
aatgaagctgtatataaaacggatatagaactttcacatgaaagatgtaaaaagtttggt
attgattcacgccaggtttttagtaaaaaaatattatatgataatgaattacagaaaaaa
tttgcagctaacagaaatctaatattgaccgcggcaccttatatggagcagctaattaat
tttgtaaagggtttcaacttctttgtattacttactgatggagaaggatgtatattaaat
gcattgggagatgaaaaaatactttcgaaagctttttctttaaagatggtaccaggggct
tttatgaatgaagaaaatattggaactaactctatgagtatggttataagtactaaaatg
ccagttcaagtttctggagatgatcattttattagagcatatcataaatggacgtgttct
gcagcacctataaaagatagtaaaggaagacttataggcgtattgaatcttactgggtat
gccgaatttgtacattctcatacacttgggatggttatagcggcgtcaaatgctatagaa
gaaatgcttaaagtaaaagaatgcaataagattcaaaatatgaattacaagcatataaaa
aatatatttaattctagtcctgtttctataataacttctgatataaatggtaaaataaaa
atttgcaataaaaaagcacaagatatgtttggtataagaggcaataagttagaagcagat
aaaatggaagatattatagaaaactggaatgatataaagacgtccatatatttaggccaa
ggtacttcaaaagaaacaaacatagtggctgtgagaaataaaactagatatcaactaact
accagttctatatataactgtgaagatgataacattgaggtagtatatgtttttgaagaa
atcaaaatggcaaagaaaagaaatgatggtcaggcttactatacttttgataaaataatt
ggtcaagatgaaagctttatgagaataatagagtatgccaaaaagatttcagatagtaaa
tcaactatacttataatgggagaaagcggtacgggaaaagaggtatttgcacaatctatt
cataattacagcagcagagtagatggaccttttatagctttgaattgtggtgctatacct
aaacaacttatagagtcagagctttttggatatgaagaaggagcttttacgggcgccaaa
aagggtggcaaccttggaaaatttgaattggcagatggcggaactataatgctggatgaa
attggagaaatgcctcttgatatgcagacaaagcttctaagagttgttcaggaaggcgta
ataacgaaaattgggagttcaaaatctatacctgtggatgttaggattgtagctgtcaca
aacagagatttaaaaaaagaagtggagcgtggaaggtttagaaaagacttatattataga
ttaaatgtactgcctttatatttaccaccacttagagaaagaaaaaaggatatacctctt
cttattcaatattttatcaagagtatatcacaaaaattaaataaaaaacaaccagttata
ccaggacaatatttacaaaaaatgattaactacagttggccgggaaacataagggaatta
gaaaatgtagtggagttaattataaatactgaatctgtacctgcaggttatttttcagaa
gaaagttgtaataatgatgtatttgtaaatattaatgaagactgcttaaaattggattac
gtggaaagggaacatttagtaaaggtgttgaagaagtttaagggaaatataactcattca
gcagcagcattgggaattaggagaaatactttgtacagcaagattaaaaaatataaaata
gaaatgtaa
DBGET
integrated database retrieval system
