Clostridium ljungdahlii: CLJU_c35330
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Entry
CLJU_c35330 CDS
T01276
Name
(GenBank) putative activator of (R)-2-hydroxyglutaryl-coA dehydratase
Organism
clj
Clostridium ljungdahlii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
DEDD_Tnp_IS110
FGGY_N
ROK
Motif
Other DBs
NCBI-ProteinID:
ADK16574
UniProt:
D8GSJ2
LinkDB
All DBs
Position
complement(3852295..3856590)
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AA seq
1431 aa
AA seq
DB search
MKNLFHVGLDVGSTTVKIVISDIKDSIVYHKYQRHFSDIKSTIAKVIKDAYEKLKDSNIT
VMVTGSGGLSVSKWLDIPFIQEVVACTNTIEQFIPETDVAIELGGEDAKITFFDGGIDQR
MNGTCAGGTGAFIDQMASLLQTDAQGLNELAKNYKVIYPIAARCGVFAKTDIQPLLNEGA
AKEDIAVSVFQSVVNQTISGLACGKVIKGNVAFLGGPLYFLSELRKRFIETLKLTDKQVI
FPENPQLFVALGAAISSKNGKVISAEDLVDRLPNLSNSSADEIQTIRPLFKDENELNEFK
KRHSTSVVKRANLNTFRGNCYLGIDAGSTTTKAALIDEEGNLLYSFYKGNEGSPLKSSVR
ILKDLYKKMPEGAHIVGSAVTGYGENLIKAALHVDIGEVETIAHYKAAEFFQPGVDFILD
IGGQDMKCLKVKDKVIDSVILNEACSSGCGSFLETFAKSLNMSVEDFAKAAETSQKPVDL
GSRCTVFMNSRVKQAQKEGASVGDISAGLSYSIIKNALFKVIKMRNSKEFGEKVIVQGGT
FYNDAVLRAFEIISGREVVRPDIAGLMGAFGSAIIAKERHQAGCESTLLSENELGNFTSE
VSMRRCGKCANNCLLTVNKFSDGKEFISGNRCERGAGLERKSQDVPDVFAYKYKRIFNYI
PLKKSEAKRGIVGIPRVLNLYENYPFWFTFFTELGFRVEISSRSSKRIYELGIETIPSES
VCYPGKMVHGHIMDLINRGVNFIFYPCIPYEKKEQENADNNYNCPIVTSYPEVIKNNMDI
LKEKDINFKNPFLSLNNEPKLAERLGEELKEFNIPQKEISSAVAKAFEESRNVKNDVRSK
GEEVIKYLKDTGKKGIVLAGRPYHIDPEINHGIPNIITSYGMAVLTEDSVAHLGVVERPL
RVVDQWVYHSRLYAAASFVAKQDNIELVQLNSFGCGLDAVTTDQTQEILNKYGKIYTVLK
IDEGSNLGAVKIRMRSLKAAIEERDKSGFKPHKVGTDYKKVLFTEEMRKKHTILCPQMSP
IHFQFLQEAFKASGYNLEVLPSVDKKAVDEGLKYVNNDACYPSIIVVGQMIEALKSGKYD
LNNTSLIISQTGGGCRATNYIGFLRKALREAGMENIPVISLNTVGLEKNPGFKITIGLVN
KAMIALLYGDLFMRVLYKVRPYEKIPGSANTLYRKWVDKCKESVKSGSHSEFKKNIYSIV
EDFDNLELNKVKKPKVGVVGEILVKFHPTANNNIVDVLEKEGAEAVVPDLTDFLLYCAYD
AEFKYKYLDGSYKDNIINKWAIKCIEYFRRHMRKALENSKRFTPPSDIEELAKYASEVLS
IGNQTGEGWFLTAEMIELIRSGAKNIVCMQPFACLPNHVTGKGMIKELKRRYKGSNIAAI
DYDPGASEVNQLNRLKLMLSVAFKSMANETSVQKPKEKLVPQAALAQSGTK
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttatttcatgtaggtcttgatgtaggttcaactacagtaaaaatagttata
tcagatattaaagatagtatagtatatcataaatatcaaagacatttttctgatataaaa
agtactatagctaaagttattaaagatgcctatgaaaaattaaaggattcaaatatcact
gtaatggttacgggttcaggtgggttatctgtatctaagtggcttgacataccgtttatt
caagaagtagtagcttgtactaatactatagaacaatttataccggagacggatgttgca
atagaattaggcggtgaagatgccaagataaccttttttgatggtggaattgatcaaaga
atgaatggaacttgtgcaggtggaactggtgcatttatagatcaaatggcatctcttctt
caaacagatgcgcagggactaaatgaattagctaaaaattacaaagtgatttatcctata
gcagcaaggtgtggtgtatttgccaaaactgatatacaacctcttttaaatgagggagct
gcaaaagaagatattgcagtatctgtatttcaatcagttgtaaatcagacaataagtgga
cttgcttgtggaaaagttataaaaggtaatgtggcatttctaggtggaccactgtatttt
ttatcagaacttagaaaaagatttatagaaactttaaagcttacggataagcaggtgatt
tttcctgaaaatcctcaattgtttgtagcacttggagcagctatttcttctaaaaatgga
aaagttatttctgctgaagatttagtagacaggcttcctaatttaagcaattcttcagca
gatgaaatacaaaccataagaccattatttaaagatgagaacgaattaaatgagtttaag
aaaagacacagtaccagtgtggtaaaaagagcgaacttgaatacatttagaggaaactgt
tatcttggaatagatgcaggatcaactacaactaaggcggcacttatagatgaagaagga
aatttactttattctttctataagggtaatgaaggcagccctttaaagtcgtctgtaaga
atattaaaggatctatacaaaaagatgcctgaaggtgcacatatagtaggttcagcagtt
acaggttatggagaaaatcttataaaagcagcactgcatgtggatataggtgaagttgaa
actattgcccactataaggcagcagaatttttccagcctggagtagattttatactggat
attggtggacaggatatgaaatgcttgaaggttaaggacaaggtaattgacagcgtaatt
ttaaatgaagcctgctcatctggatgtggatctttcttagagacttttgctaaatcactt
aatatgagtgtagaagactttgcaaaagctgcagaaacttcccaaaaacctgtggatttg
ggttccaggtgtactgtatttatgaattcgagagttaaacaagctcaaaaagaaggagct
tcagtaggagatatatctgcaggactttcttattcaattataaagaatgctttatttaaa
gtaataaagatgagaaattcaaaagaatttggagaaaaggtaatagtacaagggggaact
ttttataacgatgctgtacttagagcctttgaaatcatatctggcagggaagtagtaaga
cctgatatagcagggcttatgggagcttttggatctgcaattattgcaaaggaaagacat
caggctgggtgtgaaagtacacttttaagtgaaaatgaactaggcaatttcacatcagaa
gtatctatgagaagatgtggaaagtgtgctaacaattgtcttttaactgtaaataaattt
tccgatggaaaagaatttatatctggaaacaggtgtgaaagaggtgcaggattagaacgt
aaaagtcaagatgtgcctgatgtttttgcttataagtataaaagaatatttaattacatt
cctcttaaaaagagcgaggcaaaaagagggatagtagggatacctcgagtgttaaattta
tacgaaaattatccattttggtttacatttttcactgagctgggatttagagtagaaata
tcttctcgttcatcaaagagaatttacgaacttggaatagaaacaataccttctgagtca
gtttgctatcctggaaagatggtccacggacatataatggaccttataaatagaggagta
aattttatattttatccatgtataccttatgagaaaaaagaacaagaaaatgcagataat
aactataactgtcctatagtaacatcttatcctgaagttataaaaaacaatatggatata
ctaaaggagaaagatattaatttcaaaaatccattcttgtctttgaataacgaacccaag
ctggcagagagacttggagaagaacttaaagagtttaatatacctcaaaaggaaatatcc
tctgcagtggcaaaagcttttgaagagagtagaaatgtaaaaaatgatgtaaggtcaaaa
ggtgaagaagtaataaaatatcttaaagatacaggtaaaaagggcatagtacttgcagga
agaccctaccatattgatccggaaataaatcatggtatacctaatataataacatcttac
ggtatggcagtacttactgaggattctgtggcacaccttggagtagtagaaagaccttta
agggtagtagatcagtgggtatatcattctagattatatgctgcagcaagttttgtggct
aaacaggacaatatagaacttgtacaattaaattcctttggctgtggattagatgcagtg
actacagatcaaactcaggaaatattaaataaatacggaaagatatatacagtacttaaa
attgatgagggtagtaatttgggggctgttaaaataagaatgcgttctcttaaggcagct
attgaagagagagataaatctggttttaaacctcataaagttggaactgattataaaaaa
gtactgtttactgaagaaatgaggaaaaagcatactatattgtgtcctcagatgtcacct
atacattttcaatttctgcaggaagcttttaaagcatctggatataacctggaggtgcta
ccttctgtagataagaaagcagtagatgagggacttaaatatgtaaataacgatgcttgt
tatccttccataatagtagtgggacaaatgatagaggcattaaaatctggaaaatatgac
ttaaataatacttctttaataatttctcaaacagggggaggatgtagggctacgaactat
ataggtttcttaagaaaggcacttagagaagctggtatggaaaatatacctgtaatatcc
ctaaacacagtgggattagaaaaaaatccaggatttaaaattaccattggacttgtaaat
aaggctatgattgcacttttatatggagacttgtttatgagagtgttgtacaaagtaagg
ccttatgaaaagataccgggatctgcaaatactctttatagaaaatgggttgataaatgt
aaggaaagtgttaaaagtggaagtcacagtgaatttaaaaaaaatatatacagcatagta
gaagacttcgacaatcttgaattaaataaagttaaaaagcctaaagttggagtagtaggg
gagatattagttaagttccatcctacagctaataacaacattgtagatgttttggaaaaa
gaaggtgcagaagcagtagttccggacttgacagattttcttttgtattgtgcttatgat
gctgaattcaaatataaatatttagatggaagttataaggacaatatcataaataaatgg
gcaattaaatgtattgaatattttagaaggcatatgagaaaagcacttgaaaatagtaaa
aggttcactcctccatcagacattgaggaactggcaaaatatgcttctgaagtgctttct
atagggaatcaaacgggtgaaggttggttcttgacagctgaaatgatagagcttataaga
agtggagcaaaaaatatcgtatgtatgcagccttttgcatgtctgcctaatcatgtaaca
ggtaagggaatgataaaggaattaaagagaagatacaagggaagtaatattgctgctata
gactatgatccaggagcaagtgaggtaaatcagctaaatagattaaaacttatgttgtct
gtggcatttaaatctatggcaaatgaaacttcagtccaaaaaccaaaagaaaaattagta
cctcaagcagcacttgctcaaagtggaactaaataa
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