Clostridium ljungdahlii: CLJU_c39020
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Entry
CLJU_c39020 CDS
T01276
Name
(GenBank) predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
clj
Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clj03019
]
CLJU_c39020
Messenger RNA biogenesis [BR:
clj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLJU_c39020
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ADK16927
UniProt:
D8GUQ0
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All DBs
Position
4246088..4246990
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AA seq
300 aa
AA seq
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MNKKELFLSNIENGHNVKLSLMVMKIIFKDTSKIVCILADKSGEIKANMPNINENITQGT
VLEVEGIKDNILDIKNYKLISDYNVSDYLPTVKRPIEDIMEEIELYTNKYIISKEARTLN
DYFFKDELFLDKFKRGIGGVSMHHNYIGGLAEHTLNVMYLTAVLCERYQCRRKEMAMLAA
KLHDIGKVYELYYDGPFKYTLRGEMEGHIVIGVELLDKAIRENPTLYSEDFIMRIKGCIV
QHHGKLEFGSPREMKTEESFIVNYADSIDATMNKICQIKDETEPDNWSEFDRRIQTKLYL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagagctttttttaagtaatatagaaaatggacataatgtaaaactatcg
ctaatggtaatgaaaataatatttaaagatacttctaaaattgtatgtatattagccgat
aaaagtggagaaataaaagctaatatgccaaatataaatgaaaatattacacaaggaaca
gtactcgaggttgaaggaattaaagataatattctagatataaagaactataagttaatt
tctgattataacgtttcagattatcttccaacagtaaaaagacctatcgaagatatcatg
gaggaaattgagctgtatacaaataaatatattatttctaaggaagctaggactttaaac
gattatttctttaaagatgaactatttctagataaatttaaaagaggaataggtggtgtc
tccatgcatcataattatataggaggccttgcggaacacaccttgaacgttatgtattta
actgctgtgctttgtgaaaggtatcaatgccggagaaaagaaatggcaatgttagcagca
aaactccatgacattggaaaagtttatgagttgtattatgatggccctttcaaatatact
cttagaggagaaatggaaggtcatattgttattggggtagagttactagataaagctatt
agagaaaatcctacattgtattcagaggattttataatgagaataaaaggatgtattgtt
cagcatcatggaaaacttgaatttggttctccaagagaaatgaaaacagaagaatcattt
atagttaactatgctgattccatagatgctactatgaataagatttgtcagataaaagat
gaaactgagcctgataattggtcagaatttgatagaagaattcaaacaaaattatactta
taa
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