| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain
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| KO |
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| Organism |
clj Clostridium ljungdahlii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:clj00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLJU_c41110 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:clj03021]
CLJU_c41110 (rpoC)
03400 DNA repair and recombination proteins [BR:clj03400]
CLJU_c41110 (rpoC)
Enzymes [BR:clj01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLJU_c41110 (rpoC)
Transcription machinery [BR:clj03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLJU_c41110 (rpoC)
DNA repair and recombination proteins [BR:clj03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLJU_c41110 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4451245..4454781)
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| AA seq |
1178 aa
MFELNNFDALQIGLASPEKIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPTKDWEC
HCGKYKRIRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEKVLYFASYVVLDPKETQLLKKQLLTEKEYREAADKYGEQNFVAGMGAESVKKLL
EEIDLDQLSVTLKEDLKSSTGQKKVRIIRRLEVVESFRKSGNKPDWMIIDVIPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNG
RRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELRMYQCGLPK
EMALELFKPFVMKKLVESGLAHNIKSAKRMVERVQTQVWDVLEEVISDHPVILNRAPTLH
RLGIQAFQPVLVEGRAIKLHPLACTAYNADFDGDQMAVHVPLSVEAQSEARFLMLAAHNI
LKPSDGKPVVVPTQDMVLGSYYLTIEKDGAKGEGRIFSSPDEVIMAYQLKQVDINAKIKV
RLTKVKDGKTISGIIDATPGKIIFNESIPQDLGFVDRSKPENEFKLEIDFLVAKKNLGKI
INKCYMKHGATKTSIMLDKIKARGYHYSTISGITVSTSDMVVPEAKKRLLGEADAAVDKI
EKMYRRGFISEEERYQRVIEKWTKTTEDVADALMDNLDKFNPIFMMADSGARGSKSQIKQ
LAGMRGLMANPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRR
LVDVSQDVIVRQEDCGTHEGYDVSEIKEGNEVIESLAERLTGRYSAEDIKDPKTGEIIIP
KDVYMDPKIAEKIEASGIKKVKIRSVFTCKSKHGVCAKCYGMNMATAKKIDIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRVEELFEARKPKGLAIVSEVSGTVKMEET
KKKRSVSIVMDTGEEVSYDIPFGSRLKVSNGDTISAGDEITEGSVNPHDILRIKGVQGAK
NYLLSEVQKVYRLQGVDINDKHLEVVIRQMTRKIKIEESGDTELLPGTMIDMFDFEEANE
KVEANGGEPAKGRVALLGITKAALATESFLSAASFQETTRVLTDAAIKGKIDPLLGLKEN
VIIGKLIPAGTGMTRYRSVRINTEDKSEEKQVSDEAEV |
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| NT seq |
3537 nt +upstreamnt +downstreamnt
ttgtttgaattaaataattttgatgcacttcaaataggcttagcttcaccagaaaaaata
agagaatggtcaagaggtgaagtaaagaaaccagaaacaataaattatagaacattaaaa
cctgaaagagatggactgttctgtgaaagaatttttggaccaactaaagattgggaatgt
cactgtggtaagtataagaggataagatacaaaggtatagtttgcgataggtgcggtgta
gaggtaactaaggcaaaggttagaagagagagaatgggacatattgagcttgcagctcct
gtatcccatatatggtactttaaaggaataccatcccgaatgggattgatcttggatatg
tcacctagagctcttgaaaaagtactatattttgcgtcttacgttgttttagatccaaaa
gaaactcaactgttaaaaaagcaacttttaactgaaaaagaatatagggaagctgcagac
aaatatggtgagcaaaattttgtagcaggtatgggtgctgaatctgttaagaaactatta
gaagaaatagacttagaccagttatctgtaaccctaaaagaagacctaaagagcagtaca
gggcaaaaaaaggtaaggataattagaagattggaagtagttgaatcttttagaaaatct
ggtaataagcctgattggatgattatagatgtaatacctgtaatcccacctgatttgaga
cctatggttcaattagatggaggaagatttgctacatcagatttgaatgatctttataga
agagtaataaatagaaataataggcttaaaaaattattagatttaggtgcgccggatata
atagttagaaatgaaaagaggatgcttcaggaagctgtagatgctcttatagataatggt
agacgtggaagagcagtaacgggacctggaaatagacctttaaaatcattatctgatatg
ttaaaaggtaaacaaggtagatttagacaaaatttgctgggaaaacgtgtagattactct
gggcgttctgttatagtagttggacctgaacttagaatgtatcaatgtggtctgcctaaa
gaaatggcacttgaattatttaagccatttgttatgaagaaattagtagaaagtggctta
gcacacaatattaaaagtgcgaagagaatggtagaaagagtacagactcaagtatgggat
gtattagaagaagtaatatcagaccatccagtaattttaaatcgtgctccaactctccat
agattaggaattcaggcatttcagcctgtacttgtagagggtagagctataaaacttcat
ccattagcatgtactgcatataatgcagactttgatggagaccaaatggcggtacatgtt
cctctatctgttgaagctcaatcagaggctagatttttaatgcttgctgcacataatata
ttaaaaccttcagatggaaagccggtagttgtgcctacacaggatatggtacttggttca
tactatttaactatagaaaaggatggagctaaaggagaaggcagaattttttcttcaccg
gacgaagtaataatggcatatcagttaaaacaggttgatattaatgccaaaataaaggtt
agacttactaaggttaaggacggaaaaactataagtggtataattgatgccaccccaggt
aaaataatatttaatgaatccatacctcaagatttgggatttgtagatagaagtaaacct
gagaacgagtttaaacttgaaattgattttcttgtagctaagaaaaacttaggtaagata
ataaataagtgctatatgaagcatggtgctactaaaacttccataatgcttgataaaata
aaagctagaggatatcattattctactataagtggtataacagtttccacttcagatatg
gtggttccagaagctaaaaaaaggctcttgggcgaagcagatgcagcagtagataaaata
gaaaaaatgtatagaagaggatttatatcagaggaagaaagatatcaaagagttattgag
aaatggactaaaactacagaagatgttgcagatgcacttatggataatctagataaattc
aatccaatatttatgatggcggattcaggagctagaggatctaaaagtcagatcaagcag
cttgcaggtatgagaggacttatggcaaatccttcaggaaagataatagaacttcctata
agagcatctttcagggaaggtttggatgtactagaatatttcatatcaactcacggagct
agaaaaggtaatgcagatactgcattaaagactgctgattctggttatcttacaagaagg
cttgtagatgtaagccaggatgttatagtaagacaagaagattgtggaactcacgaagga
tacgacgtttctgaaataaaagagggaaatgaagttatagaaagtttggcagaaagactt
actggtaggtattctgctgaagatattaaagatcctaaaactggagaaataataatacca
aaagatgtttatatggatccaaaaatagctgagaaaatagaagcttctggaattaaaaaa
gtaaagattaggtccgtatttacctgtaagtcaaaacatggagtatgtgcaaagtgttac
ggtatgaatatggctactgcaaagaaaattgatataggagaggctgtaggtataatagca
gctcaaagtataggagagccaggtacacagctcactatgagaactttccatactggagga
gttgcaggatctgatataactcaaggtcttcctagagttgaagaattatttgaagctaga
aaaccaaaggggcttgctatagtaagtgaggtttcaggtactgtaaaaatggaagaaacc
aaaaagaagagaagtgtttccatagttatggatactggagaagaagtaagctatgatata
ccgtttggttcaagacttaaagtatctaatggagatacaataagtgctggagatgagata
acagaaggttctgtaaatccacatgatattttaagaataaaaggtgttcagggagctaaa
aattatcttttgtctgaagttcaaaaagtttacagacttcagggtgttgatataaatgat
aagcatctagaagtagtaataagacagatgacaagaaagattaaaatagaggaatcggga
gatacagaattgcttccaggaactatgattgatatgtttgattttgaagaggctaatgaa
aaagtagaagctaatggtggagaaccagctaaaggaagggtagctttacttggtataact
aaagcagcacttgcaactgaatctttcctttctgcagcgtcgttccaggaaactacaaga
gttcttacagatgcagctataaagggcaaaatagatccattactaggattgaaggaaaat
gtaattataggtaaacttataccagcaggaacaggtatgaccaggtataggtctgtaaga
attaatacagaagataaatctgaagaaaaacaggtaagtgatgaggcagaagtgtag |
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